PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00468g10023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | VOZ | ||||||||
Protein Properties | Length: 447aa MW: 49461.4 Da PI: 5.5588 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 419.2 | 7.1e-129 | 166 | 385 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipeceg 82 pppsaflgpkcalwdc+rp+ gs+w+q dycs +ha+la neg g pv+rp gi+lkd+llf+alsak+qgk+vgipeceg Peaxi162Scf00468g10023.1 166 PPPSAFLGPKCALWDCPRPSMGSDWCQqshDYCSVYHASLAPNEGYSGSPPVVRPMGIGLKDNLLFQALSAKAQGKDVGIPECEG 250 89***********************976668****************************************************** PP VOZ 83 aatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167 aat+kspwna+elfdl+++egetirewlffd+prrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++++ew Peaxi162Scf00468g10023.1 251 AATTKSPWNAPELFDLKVVEGETIREWLFFDRPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMKNLEW 335 ************************************************************************************* PP VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 hlyeyein++da+alyrlelklvd+kks+kgkv+++s+a lqk++grlta Peaxi162Scf00468g10023.1 336 HLYEYEINKYDACALYRLELKLVDGKKSPKGKVTNESVAALQKQMGRLTA 385 ************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence Send to blast |
MGKGSKSGVG KSATHQFFKD RAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQGGSRVS 60 SDIYRLLLGE EEDDATSALA AAKPEPDARK NDVAGLQQGS DVPQLLQEQG YQFVDQCKNV 120 PLVLNNAGMN NQGTATQLDD FDQFFPGFDA LNLSLEDVLP PIHPSPPPSA FLGPKCALWD 180 CPRPSMGSDW CQQSHDYCSV YHASLAPNEG YSGSPPVVRP MGIGLKDNLL FQALSAKAQG 240 KDVGIPECEG AATTKSPWNA PELFDLKVVE GETIREWLFF DRPRRAFESG NRKQRSLPDY 300 NGRGWHESRK QVMNEYGGLK RSYYMDPQPM KNLEWHLYEY EINKYDACAL YRLELKLVDG 360 KKSPKGKVTN ESVAALQKQM GRLTADIPLE NKRFAKGRAK SNQKDVATGN MPAAPDRVVP 420 ASEGFDYGTG EPSPDYLVDN LGGYYIT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019229404.1 | 0.0 | PREDICTED: transcription factor VOZ1-like | ||||
Refseq | XP_019229405.1 | 0.0 | PREDICTED: transcription factor VOZ1-like | ||||
Refseq | XP_019229406.1 | 0.0 | PREDICTED: transcription factor VOZ1-like | ||||
Swissprot | Q9SGQ0 | 1e-175 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A314KL98 | 0.0 | A0A314KL98_NICAT; Transcription factor voz1 | ||||
STRING | XP_009776508.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2818 | 24 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-169 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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