PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00405g01325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | Dof | ||||||||
Protein Properties | Length: 128aa MW: 14433.5 Da PI: 8.2094 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 56 | 8.1e-18 | 7 | 39 | 2 | 34 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCk 34 ++++lkc+rCd ntkfCyynny+lsqPr++Ck Peaxi162Scf00405g01325.1 7 EQEHLKCARCDLPNTKFCYYNNYNLSQPRHYCK 39 57899***************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 8.0E-14 | 3 | 39 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.4E-14 | 9 | 39 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
INPHFPEQEH LKCARCDLPN TKFCYYNNYN LSQPRHYCKI VDGIGLKVIQ NLRKHAPGTP 60 IILVGDSDRT RSGLKSIQAL DDLVKRNEED ARNLVRTEGL ELYVGLNYRT AVPGEVLISA 120 MSLFCSSS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 3e-20 | DOF zinc finger protein 1 |