PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00397g00022.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 304aa    MW: 35154.7 Da    PI: 4.1387
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00397g00022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.26.9e-1911383128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksg 81 
                               +GfrFhP+d e++ +yL   +++++l+l++  ++ +d+y   ePw++ +++k+    +++  y  ++ +k +a +kr  r++ +g
  Peaxi162Scf00397g00022.1   1 MGFRFHPKDVEVM-KYLLGFATNNPLPLQDElMQFADLYADkEPWQIFQACKSheciNKNARYIITQLKKVAAGKKRVARTVGKG 84 
                               59*********99.9**********99988757777*997559****753333234355677999999999999*********** PP

                       NAM  82 yWkatgkdkevlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                               +Wk++ k k++l+++g+l+g  +t+ +        + ++ +  + +W+m ey+l
  Peaxi162Scf00397g00022.1  85 TWKSQDKGKKLLDTSGRLMGFVTTFKYNpnnnkknTTNNDNNDNGEWLMREYSL 138
                               ***************************9877654434555566999******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.4041161IPR003441NAC domain
SuperFamilySSF1019411.09E-232161IPR003441NAC domain
PfamPF023651.2E-112138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGFRFHPKDV EVMKYLLGFA TNNPLPLQDE LMQFADLYAD KEPWQIFQAC KSHECINKNA  60
RYIITQLKKV AAGKKRVART VGKGTWKSQD KGKKLLDTSG RLMGFVTTFK YNPNNNKKNT  120
TNNDNNDNGE WLMREYSLAD KYLDASQIKN KDFVICRIKK KETKGDNIQE VNNDGDVEVL  180
LTDHIEENNN NEYYVIDDED NIQVVDSDGD VESTPADHIE ENNNNEYSMI EGDDIINLMD  240
NQDDMVLLTD HIEENNNNEY YVIDDESTIF MVVDSDGDVE GDVEEYINFR LQEDHVQEDV  300
MDND
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.12e-11NAC domain containing protein 53