PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00380g00816.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 471aa    MW: 52007.3 Da    PI: 6.6529
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00380g00816.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10181223446
                               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                                k +rr+++NReAAr+sR+RKka++++Le+   +L++  ++Lk
  Peaxi162Scf00380g00816.1 181 QKTQRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELK 223
                               589***************************9888888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-8178243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.691180224IPR004827Basic-leucine zipper domain
PfamPF001704.2E-7182223IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.7E-8182227No hitNo description
SuperFamilySSF579598.84E-7182225No hitNo description
CDDcd147081.33E-20182233No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
PfamPF141443.5E-31267340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MQAYKAVVPP VTLNNNNNNS NMYCQSTFYL RGDEGSRHAA ARFADIGELE QSTGFPQDDA  60
VDLTRSCVYG EMRPSNVAVV SSNNLHFEIG SSETGVETGR FTYQKAAQNA AAMVGGGGAV  120
ALGNGHFENW ADSGIADHSQ QTDTSTDVDT DERIHQGQGV QHGALIAVDS MDQSKIKPGD  180
QKTQRRLAQN REAARKSRLR KKAYVQQLEN SRLKLTQLEQ ELKRARQQGV FIANGYAADQ  240
SLSAGGNGAL AFDMDYARWL EEHQRLISDL RSAVNSHRAD NDLRLLVEGV MSHYDEIFKL  300
KSVGAKSDVF HMLSGMWKTP AERCFMWLGG FRSSELLKIL GNHLEPLTEQ QLMGICNLQQ  360
SSQQAEDALS QGMEALQQSL VETLSSTSLG PTGSGNVADY MGQMAIAMGK LATLENFLYQ  420
ADLLRQQTLQ QLHRILTTRQ AARALLVISD YMSRLRALSS LWLARPKDQL Q
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755172e-45HG975517.1 Solanum lycopersicum chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009799344.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X3
RefseqXP_016450867.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ415581e-175HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1S3YG110.0A0A1S3YG11_TOBAC; transcription factor HBP-1b(C38)-like isoform X1
TrEMBLA0A1U7YJD40.0A0A1U7YJD4_NICSY; transcription factor HBP-1b(C38)-like isoform X3
STRINGXP_009799342.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-140bZIP family protein