PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00314g00115.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 311aa    MW: 33955.2 Da    PI: 6.2619
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00314g00115.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.65.3e-33163220259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  Peaxi162Scf00314g00115.1 163 EDGYRWRKYGQKAVKNSPFPRSYYRCTNTKCTVKKRVERSSEDPSIVITTYEGQHCHH 220
                               8******************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-34147221IPR003657WRKY domain
SuperFamilySSF1182901.83E-28154220IPR003657WRKY domain
PROSITE profilePS5081129.643157222IPR003657WRKY domain
SMARTSM007744.5E-39162221IPR003657WRKY domain
PfamPF031066.6E-26163220IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MDEKDKLKDK IGVPDSSWSL GADDSENVYS YFGSTDRDDN SILSEFGWNF QSSDSAEAGV  60
CGGMSGSRVD LIESDLAGNS STNNTTLSVP ESTTSTGKIT DEPAASSSST DDPPEKSTGS  120
GGSSAASRPP SDTASNKVKK KGQKRMRQPR FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP  180
FPRSYYRCTN TKCTVKKRVE RSSEDPSIVI TTYEGQHCHH TVGFPRGGFI SHETPFTNQL  240
TTPLASQFYQ LPGVHQYPQE VPISAPESRQ IPTREAGEPR RLPEPSNQPA NQAPTDDGLL  300
GDIVSPGMRS R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-25152219774Probable WRKY transcription factor 4
2lex_A1e-25152219774Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00067PBMTransfer from AT1G69310Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0139331e-131BT013933.1 Lycopersicon esculentum clone 132931F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019231350.11e-142PREDICTED: probable WRKY transcription factor 57
RefseqXP_019231352.11e-142PREDICTED: probable WRKY transcription factor 57
TrEMBLA0A314KI441e-141A0A314KI44_NICAT; Putative wrky transcription factor 57
STRINGXP_009610330.11e-141(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80312228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.25e-67WRKY DNA-binding protein 57