PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00295g01125.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | MYB_related | ||||||||
Protein Properties | Length: 299aa MW: 33988.2 Da PI: 6.1264 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.6e-17 | 14 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++++++G g+W++ ++ g Rt++++k++w+++l Peaxi162Scf00295g01125.1 14 KGPWTPEEDQKLTNYINKHGHGSWRALPKLAG--RTDNEIKNFWNTHL 59 79*****************************8..***********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.4E-22 | 5 | 66 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 21.332 | 9 | 63 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.6E-16 | 10 | 68 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 5.8E-15 | 13 | 61 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.1E-15 | 14 | 59 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 7.12E-13 | 16 | 59 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MGRSPCCDES GLKKGPWTPE EDQKLTNYIN KHGHGSWRAL PKLAGRTDNE IKNFWNTHLK 60 KKLIQMGYDP MTHRPRTDIF DSLQQLIALA KLKELMEHHS WEEQAMRLQS EVAKLNYLQN 120 FLQPHNTSFN AIQDIEAYNL LNSLSSFKDS LVLGTNNHLQ IPTISTSSSL QAIQDSIPFS 180 HLPELQTPRS NFKTSLNKDS VRPQNTEFNV MSHGETSPTS PWLTSSLSPS PPPPVINDET 240 KNENSLEVMI SSCLPEERKL SDHLFQPNNE RSLSNEGAPP SVWPDLLLED SFFQDIVKF |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975444 | 3e-58 | HG975444.1 Solanum pennellii chromosome ch05, complete genome. | |||
GenBank | HG975517 | 3e-58 | HG975517.1 Solanum lycopersicum chromosome ch05, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016494001.1 | 1e-143 | PREDICTED: myb-related protein 330-like | ||||
TrEMBL | A0A1S4BYM2 | 1e-142 | A0A1S4BYM2_TOBAC; myb-related protein 330-like | ||||
STRING | XP_009606781.1 | 1e-140 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12 | 24 | 2154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10280.1 | 1e-57 | myb domain protein 92 |