PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00284g00033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 355aa MW: 39275.5 Da PI: 4.6268 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.8e-18 | 80 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa a++ a+++++g Peaxi162Scf00284g00033.1 80 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAALAYDDAARAMYG 130 56*****999.**********8...3.35************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.17E-30 | 80 | 139 | No hit | No description |
Pfam | PF00847 | 6.5E-13 | 80 | 130 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-30 | 81 | 139 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.62E-20 | 81 | 138 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.9E-35 | 81 | 144 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.338 | 81 | 138 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-9 | 82 | 93 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.2E-9 | 104 | 120 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MTILDQAPKM DSLPLDYARK RKSRRRGGTK NVAETLAKWK EYNQKLDTVD DEGKPIRKVP 60 AKGSKKGCMK GKGGPDNSRC NYRGVRQRTW GKWVAEIREP NRGSRLWLGT FPTAIEAALA 120 YDDAARAMYG PCARLNLPNY PSSRESSKDD SSWATTSVSD STAGSSYSEV CPAGEMNGTF 180 ETKYEDGDGE SRIDGAAGLH EGGTPPLSSV KKEDGVAGLV AKMDIVEAKE EPRSIDQDML 240 KSGRDYLDNI NWDEMFDVEE LLGMLNSTGG APASNQDFGP IASQKEQYMY NNNQLSDSSF 300 QQHADYKVSG DTQPMEQQPP IVDYGFEFLR PGRQEDLNFS LDDLALIDLD YELGV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 4e-16 | 81 | 138 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00302 | DAP | Transfer from AT2G40340 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009612863.1 | 1e-159 | PREDICTED: dehydration-responsive element-binding protein 2C-like | ||||
Refseq | XP_016460453.1 | 1e-159 | PREDICTED: dehydration-responsive element-binding protein 2C-like | ||||
TrEMBL | A0A1S3Z7S5 | 1e-158 | A0A1S3Z7S5_TOBAC; dehydration-responsive element-binding protein 2C-like | ||||
STRING | XP_009612863.1 | 1e-159 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3701 | 24 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.1 | 8e-41 | DRE-binding protein 2A |