PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00274g00057.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Nin-like
Protein Properties Length: 320aa    MW: 36367 Da    PI: 4.9057
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00274g00057.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.93.2e-26153201452
                    RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                +s e++skyF++pi++AAkeL+++lT+LK++CR++GI+RWPhRk+ sl
  Peaxi162Scf00274g00057.1 153 MLSRETISKYFYMPITQAAKELNIGLTLLKKRCRELGIRRWPHRKLMSL 201
                               6899******************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.518133222IPR003035RWP-RK domain
PfamPF020421.3E-21154201IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MASQSNFGKM SKEDDHQDVF SLATQLPSLD FSGYYSGYCA ADYQYDLSIQ EGAFDTNPLE  60
MFFDDSLYSS FYSTPIQRLI PGELDYGDLG SGFIAWNEAA EFGLLSTEQG PGNHQLLLCD  120
KNQEIMITNC VENKEGSPKQ EADDSNIYCS SRMLSRETIS KYFYMPITQA AKELNIGLTL  180
LKKRCRELGI RRWPHRKLMS LETLIKNVKE LEKRGGNGAE QKLKEVVKLL EKEKKMLKEI  240
PDKQLEEKTK RLRQACFKAN YKRRKLMSMT QDSFGNYCNG AAAAAAVGYE HREEEDDDDE  300
EIKSLLADCF SSSSPTLHES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754422e-50HG975442.1 Solanum pennellii chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009778708.11e-131PREDICTED: protein RKD1
TrEMBLA0A1U7WJ791e-129A0A1U7WJ79_NICSY; protein RKD1
STRINGXP_009778708.11e-130(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42742142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-45RWP-RK domain-containing protein