PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00252g00228.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bZIP

Protein Properties

Length: 363aa MW: 38902.6 Da PI: 9.428

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00252g00228.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.5	3.8e-15	285	335	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ Peaxi162Scf00252g00228.1 285 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKKQEEMLEM 335 79***************************************9888776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-14	281	346	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.473	283	332	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.35E-29	285	339	No hit	No description
Pfam	PF00170	3.9E-13	285	336	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.9E-15	285	343	No hit	No description
SuperFamily	SSF57959	2.75E-11	285	334	No hit	No description
PROSITE pattern	PS00036	0	288	303	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
MGSNFHFKNF GNEPPGEGGS SGGGKQLGNF QLPRQPSIYS LTFDEFLSTT GGTGKDFGSM 60 NMDELLKNIW NAEESQTVGG SGIVGQEVGG QGPQGGYLQR QGSLTLPRTL SQKTVDEVWK 120 DMSKEYGGGT GKDGNSSVPV SSNLPQRQPT LGEITLEEFL VRAGVVREDA QLAAKSNNAA 180 GIFADLAYGN NTGIGFGYQQ ASMVGISDPA LNTNFVQGAA LTGGGMSMVG LGAGGVTVAA 240 VSPAVSSDGL GKSNGDTPSV SPIPYVFNGG IRGRKYSTVE KVVERRQRRM IKNRESAARS 300 RARKQAYTME LEAEVAKLKE ENQELQKKQE EMLEMQKNQV MEMLNLQRGA KRRCLRRTQT 360 GPW

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

MGSNFHFKNF GNEPPGEGGS SGGGKQLGNF QLPRQPSIYS LTFDEFLSTT GGTGKDFGSM  60
NMDELLKNIW NAEESQTVGG SGIVGQEVGG QGPQGGYLQR QGSLTLPRTL SQKTVDEVWK  120
DMSKEYGGGT GKDGNSSVPV SSNLPQRQPT LGEITLEEFL VRAGVVREDA QLAAKSNNAA  180
GIFADLAYGN NTGIGFGYQQ ASMVGISDPA LNTNFVQGAA LTGGGMSMVG LGAGGVTVAA  240
VSPAVSSDGL GKSNGDTPSV SPIPYVFNGG IRGRKYSTVE KVVERRQRRM IKNRESAARS  300
RARKQAYTME LEAEVAKLKE ENQELQKKQE EMLEMQKNQV MEMLNLQRGA KRRCLRRTQT  360
GPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KF736850	0.0	KF736850.1 Nicotiana tabacum ABRE binding factor (ABF2) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021601955.1	1e-140	bZIP transcription factor 23-like isoform X1
Swissprot	Q9M7Q4	1e-110	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A164ZPF8	1e-139	A0A164ZPF8_DAUCS; Uncharacterized protein
TrEMBL	A0A251IQF6	1e-138	A0A251IQF6_MANES; Uncharacterized protein
STRING	cassava4.1_007256m	1e-138	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-39	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]