PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00248g00012.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

VOZ

Protein Properties

Length: 457aa MW: 51111.4 Da PI: 6.0317

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00248g00012.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	414.6	1.7e-127	179	398	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipeceg 82 pppsaflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg g pv+rp gi+lkd+llf+al ak++gk+vg+peceg Peaxi162Scf00248g00012.1 179 PPPSAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYHGRPPVVRPMGIGLKDNLLFQALGAKAHGKDVGVPECEG 263 89*********************944459************************************************** PP VOZ 83 aatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167 aatakspwna+elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp++++ew Peaxi162Scf00248g00012.1 264 AATAKSPWNAPELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPMQNLEW 348 ********************************************************************************* PP VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 hlyeyein++d++alyrlelklvd+kks+kgkv++ s+adlqk++grlta Peaxi162Scf00248g00012.1 349 HLYEYEINKYDTYALYRLELKLVDGKKSPKGKVNNVSVADLQKQMGRLTA 398 **********************************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence Send to blast
EEFKLRGSKS GACKSASHQL FKDRAKNRVD DLQGVLTNLQ SARKESRNFD VGLLEEQGGS 60 RVSSSDIYRL LLGEEEDDAT SALAAPKPEP DAQKVSVTGF QEGFNVNQVM QEQGFQLVDQ 120 CKSLPLVANN AGINNVGVAT QLDFHSFDLH QEYNQQYFPG FDAINVCLED SLPPVHISPP 180 PSAFLGPKCA LWDCPRPAMG SDWCQKSQDY CSDYHASLAP NEGYHGRPPV VRPMGIGLKD 240 NLLFQALGAK AHGKDVGVPE CEGAATAKSP WNAPELFDLK VVEGETIREW LFFDKPRRAF 300 ESGNRKQRSL PDYNGRGWHE SRKQVMNEFG GLKRSYYMDP QPMQNLEWHL YEYEINKYDT 360 YALYRLELKL VDGKKSPKGK VNNVSVADLQ KQMGRLTAEF PLDNKRTVKG RAKANMKNVG 420 NIHAAPLPIV PTCEGFDYGT GDPYDYLVDN LDSYFIT

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence Send to blast

EEFKLRGSKS GACKSASHQL FKDRAKNRVD DLQGVLTNLQ SARKESRNFD VGLLEEQGGS  60
RVSSSDIYRL LLGEEEDDAT SALAAPKPEP DAQKVSVTGF QEGFNVNQVM QEQGFQLVDQ  120
CKSLPLVANN AGINNVGVAT QLDFHSFDLH QEYNQQYFPG FDAINVCLED SLPPVHISPP  180
PSAFLGPKCA LWDCPRPAMG SDWCQKSQDY CSDYHASLAP NEGYHGRPPV VRPMGIGLKD  240
NLLFQALGAK AHGKDVGVPE CEGAATAKSP WNAPELFDLK VVEGETIREW LFFDKPRRAF  300
ESGNRKQRSL PDYNGRGWHE SRKQVMNEFG GLKRSYYMDP QPMQNLEWHL YEYEINKYDT  360
YALYRLELKL VDGKKSPKGK VNNVSVADLQ KQMGRLTAEF PLDNKRTVKG RAKANMKNVG  420
NIHAAPLPIV PTCEGFDYGT GDPYDYLVDN LDSYFIT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT014516	0.0	BT014516.1 Lycopersicon esculentum clone 133906R, mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009780205.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009780206.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009780207.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016472599.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016472601.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016472602.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S4A7N1	0.0	A0A1S4A7N1_TOBAC; transcription factor VOZ1-like
TrEMBL	A0A1U7WSB8	0.0	A0A1U7WSB8_NICSY; transcription factor VOZ1-like
STRING	XP_009780205.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]