PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00226g00319.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 594aa    MW: 67007 Da    PI: 4.4507
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00226g00319.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.41.1e-52201462128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                               ppGfrFhPtdeelv +yLk+k+ ++++ l ++i+e+d+yk++P+dLp  +k+k+++++w+fFs+rd+ky++g r+nratk+gyWk
  Peaxi162Scf00226g00319.1  20 PPGFRFHPTDEELVLYYLKRKICRRRILL-DAIAETDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWK 103
                               9*************************999.99**************96559999******************************* PP

                       NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               atgkd+++++ ++++vg+kktLvfykgrap ge+tdWvmhey++
  Peaxi162Scf00226g00319.1 104 ATGKDRTIMC-NSRAVGVKKTLVFYKGRAPVGERTDWVMHEYTM 146
                               **********.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.01E-6013169IPR003441NAC domain
PROSITE profilePS5100556.30819169IPR003441NAC domain
PfamPF023651.4E-2720145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    Send to blast
MDTSSTSKEI KVIDENSVFP PGFRFHPTDE ELVLYYLKRK ICRRRILLDA IAETDVYKWD  60
PEDLPDLSKL KTGDRQWFFF SPRDRKYPNG ARSNRATKHG YWKATGKDRT IMCNSRAVGV  120
KKTLVFYKGR APVGERTDWV MHEYTMDEDE LKRCENAQDY YALYKVFKKS GPGPKNGEQY  180
GAPFREEDWA DDDCPSGEVS VHQENSTQHV SEAPATDNAL EELMNHVADD PVRFEPFSVD  240
YDYILEQIVQ EEDNESTLLD QSLREVNVHS HSAVVDPSCL QYNAKASFDL TQSGTSQLQL  300
HEAPEVSSAP VNSEKPLRTV EEDFLEDFLE MDDLLGPEPS GANFDHPGDC IQNFDNQSSS  360
GQIFDKPAGN LETLQFDDFD GLGEFDLYHD APLLLNDAGT AMVGQNGESY MNNFVNEIAD  420
PVSTTYMSTF QNDMMSNQQI HWNHENHINN QLWRHDERFN VFNPIEGNQF VVSQATSGVV  480
YDSNMENHPM GANQNPIAKK DDGTQSWFSS NLWAFVDSIP TTPASAAESA LVNRAFERMS  540
SFSRVKLNAR NMNVATGNTS ATSSSSGKPR NGFFCFSLLG VLCAILWVLI GTLC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-481914615140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5098700.0AF509870.1 Petunia x hybrida nam-like protein 7 (NH7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009599075.10.0PREDICTED: NAC domain-containing protein 17-like isoform X1
TrEMBLQ8LRL80.0Q8LRL8_PETHY; Nam-like protein 7
STRINGXP_009599075.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-116NAC domain containing protein 17