PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00222g00624.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 300aa    MW: 34461 Da    PI: 7.1267
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00222g00624.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.35.9e-5391341128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               lppGfrFhPtdeel+++yL+ +++++++++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWka
  Peaxi162Scf00222g00624.1   9 LPPGFRFHPTDEELIMYYLRYQATSRPCPV-SIIPEVDVYKFDPWELPEKAEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKA 92 
                               79****************************.89***************99999******************************** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               tg+dk+++s  ++ vg+kk Lvfykg+ pkg+ktdW+mheyrl
  Peaxi162Scf00222g00624.1  93 TGTDKAIYS-VSKYVGVKKALVFYKGKPPKGVKTDWIMHEYRL 134
                               *********.8899***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-645161IPR003441NAC domain
PROSITE profilePS5100560.9719161IPR003441NAC domain
PfamPF023656.8E-2610134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009825Biological Processmultidimensional cell growth
GO:0009835Biological Processfruit ripening
GO:0009908Biological Processflower development
GO:0010150Biological Processleaf senescence
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MVGKISSDLP PGFRFHPTDE ELIMYYLRYQ ATSRPCPVSI IPEVDVYKFD PWELPEKAEF  60
GENEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SVSKYVGVKK ALVFYKGKPP  120
KGVKTDWIMH EYRLSDSRSP PTKQSGSMRL DDWVLCRIYK KKSLGKTMEM MKVEEESEAQ  180
IVSSTNNAIE EVAAASGPQT TKMPRTCSLS HLLELDYFGS IPQLLGDNSY HASFDNDQTY  240
IMTNVANTNV VQHMEKSQLG EVSHQVMGQT NNFNNFFNQP LFNSSDDTWT LLWNEFSRMK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-71916317167NO APICAL MERISTEM PROTEIN
1ut4_B1e-71916317167NO APICAL MERISTEM PROTEIN
1ut7_A1e-71916317167NO APICAL MERISTEM PROTEIN
1ut7_B1e-71916317167NO APICAL MERISTEM PROTEIN
3swm_A1e-71916320170NAC domain-containing protein 19
3swm_B1e-71916320170NAC domain-containing protein 19
3swm_C1e-71916320170NAC domain-containing protein 19
3swm_D1e-71916320170NAC domain-containing protein 19
3swp_A1e-71916320170NAC domain-containing protein 19
3swp_B1e-71916320170NAC domain-containing protein 19
3swp_C1e-71916320170NAC domain-containing protein 19
3swp_D1e-71916320170NAC domain-containing protein 19
4dul_A1e-71916317167NAC domain-containing protein 19
4dul_B1e-71916317167NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00221DAPTransfer from AT1G69490Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019224453.11e-173PREDICTED: NAC transcription factor 29-like
SwissprotK4BWV21e-158NAP1_SOLLC; NAC domain-containing protein 1
TrEMBLA0A314KVQ01e-171A0A314KVQ0_NICAT; Nac transcription factor 29
STRINGXP_009773865.11e-170(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-113NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]