PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00218g00178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | SAP | ||||||||
Protein Properties | Length: 453aa MW: 50558.8 Da PI: 6.1375 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 736.3 | 2.6e-224 | 1 | 452 | 1 | 454 |
SAP 1 mssssssssseseegseggeggdassgesegpsssrqr..aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstw 83 msssss ss g gg g + sge+egpsssr+r a n+vwpePfle la va+dasrs+Grl aa+ala vfqvcstw Peaxi162Scf00218g00178.1 1 MSSSSSPPSS--LGGVGGGDG-SHVSGEFEGPSSSRSRirAENDVWPEPFLEDLALIVATDASRSIGRLGAAQALALVFQVCSTW 82 5555554444..444434444.55568999999888766699******************************************* PP SAP 84 ravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadv.dedndadalsCrclalsdkylaaGf 167 +avs sdllwq+ltrriW+r +llr+tWreeyiy+h++a+nfr+ ry+y tl+f p ++ d++n++d l Cr+lalsd++laaGf Peaxi162Scf00218g00178.1 83 QAVSHSDLLWQNLTRRIWNRHHLLRQTWREEYIYWHQAANNFRHHRYAYNTLHFVPENNeDNNNNNDGLFCRRLALSDHHLAAGF 167 *******************************************************9876155677899***************** PP SAP 168 adGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaG 252 adG+v+lf l trlh+stf+p+h+drlGrfsravsGi+++d +lvfa+ldGdihv vi aa++rra+lGdvvndGalvdf+G Peaxi162Scf00218g00178.1 168 ADGSVQLFYLPTRLHLSTFHPHHHDRLGRFSRAVSGIILTDVQLVFASLDGDIHVVVIGD--AAPPRRAHLGDVVNDGALVDFTG 250 **********************************************************98..78********************* PP SAP 253 sgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlr 337 +++WwvGlyaGvpGrafhiW+ eteelvfvGG ltdPea+mGWhmlte+telvGrvrvt retavaCtsl+++v+dl+nqg+++r Peaxi162Scf00218g00178.1 251 CDQWWVGLYAGVPGRAFHIWNRETEELVFVGGELTDPEALMGWHMLTEVTELVGRVRVTTRETAVACTSLQVMVIDLQNQGIIIR 335 ************************************************************************************* PP SAP 338 eeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylysl 421 + +rrGliv+s+d+ ne++v+vdsrGva+vrrv++lee+crf+vrg q gvlgC+nggya+++ g v+rvWeie+ + ylys+ Peaxi162Scf00218g00178.1 336 AQPFRRGLIVASFDVRNETLVTVDSRGVASVRRVDDLEEICRFNVRGaNQMGVLGCMNGGYAIMWLGNVIRVWEIEHGA-YLYSI 419 ***********************************************999***************************77.***** PP SAP 422 rervgevnalvaddrhvavsssdgtihlldfga 454 rer+g+vna+vad+r++a++ssd+tihl+dfga Peaxi162Scf00218g00178.1 420 RERIGDVNAIVADERYLAACSSDSTIHLWDFGA 452 ********************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.1280.50 | 1.6E-6 | 69 | 131 | No hit | No description |
SuperFamily | SSF81383 | 2.62E-7 | 70 | 157 | IPR001810 | F-box domain |
Gene3D | G3DSA:2.130.10.10 | 2.2E-13 | 132 | 226 | IPR015943 | WD40/YVTN repeat-like-containing domain |
SuperFamily | SSF50998 | 2.35E-14 | 137 | 282 | IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
Gene3D | G3DSA:2.130.10.10 | 2.2E-13 | 274 | 450 | IPR015943 | WD40/YVTN repeat-like-containing domain |
SuperFamily | SSF50998 | 2.35E-14 | 322 | 450 | IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
PROSITE profile | PS50294 | 10.258 | 405 | 453 | IPR017986 | WD40-repeat-containing domain |
PROSITE profile | PS50082 | 9.071 | 432 | 453 | IPR001680 | WD40 repeat |
PROSITE pattern | PS00678 | 0 | 436 | 450 | IPR019775 | WD40 repeat, conserved site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009554 | Biological Process | megasporogenesis | ||||
GO:0009908 | Biological Process | flower development | ||||
GO:0030163 | Biological Process | protein catabolic process | ||||
GO:0046622 | Biological Process | positive regulation of organ growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence Send to blast |
MSSSSSPPSS LGGVGGGDGS HVSGEFEGPS SSRSRIRAEN DVWPEPFLED LALIVATDAS 60 RSIGRLGAAQ ALALVFQVCS TWQAVSHSDL LWQNLTRRIW NRHHLLRQTW REEYIYWHQA 120 ANNFRHHRYA YNTLHFVPEN NEDNNNNNDG LFCRRLALSD HHLAAGFADG SVQLFYLPTR 180 LHLSTFHPHH HDRLGRFSRA VSGIILTDVQ LVFASLDGDI HVVVIGDAAP PRRAHLGDVV 240 NDGALVDFTG CDQWWVGLYA GVPGRAFHIW NRETEELVFV GGELTDPEAL MGWHMLTEVT 300 ELVGRVRVTT RETAVACTSL QVMVIDLQNQ GIIIRAQPFR RGLIVASFDV RNETLVTVDS 360 RGVASVRRVD DLEEICRFNV RGANQMGVLG CMNGGYAIMW LGNVIRVWEI EHGAYLYSIR 420 ERIGDVNAIV ADERYLAACS SDSTIHLWDF GAE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009596786.1 | 0.0 | PREDICTED: transcriptional regulator STERILE APETALA-like | ||||
Refseq | XP_016468216.1 | 0.0 | PREDICTED: transcriptional regulator STERILE APETALA-like | ||||
Swissprot | Q9FKH1 | 1e-171 | SAP_ARATH; Transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A1S3ZUZ2 | 0.0 | A0A1S3ZUZ2_TOBAC; transcriptional regulator STERILE APETALA-like | ||||
STRING | XP_009596786.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4099 | 23 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 1e-170 | SAP family protein |
Publications ? help Back to Top | |||
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