PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00207g01131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | Dof | ||||||||
Protein Properties | Length: 169aa MW: 18862.8 Da PI: 8.9102 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122 | 2.1e-38 | 17 | 76 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++lkcprC+s ntkfCyynny+lsqPr+fCk+C+ryWtkGG+lr +PvGgg+rk+ k+ Peaxi162Scf00207g01131.1 17 EQEILKCPRCESLNTKFCYYNNYNLSQPRHFCKSCKRYWTKGGTLRKIPVGGGSRKHTKR 76 57899***************************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-27 | 11 | 76 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.7E-33 | 19 | 75 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.286 | 21 | 75 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 23 | 59 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MQEPSIYTQI NQPLIPEQEI LKCPRCESLN TKFCYYNNYN LSQPRHFCKS CKRYWTKGGT 60 LRKIPVGGGS RKHTKRSPNN NNKRYSTTST SAARPTVPAF DQSSPILDVN GPFSSLSTSN 120 GPEFGNLLGR ESSSSGLVSG QDDIPQSGNK YYTDEYLGVQ NDGDSSYWN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006357370.1 | 1e-61 | PREDICTED: dof zinc finger protein DOF3.1-like | ||||
TrEMBL | A0A0V0HDG7 | 2e-60 | A0A0V0HDG7_SOLCH; Putative dof zinc finger protein DOF3.1-like | ||||
STRING | XP_009593393.1 | 1e-59 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 1e-38 | DOF zinc finger protein 1 |