PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00160g01615.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bZIP

Protein Properties

Length: 401aa MW: 45207.8 Da PI: 8.5741

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00160g01615.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.8	7.5e-11	104	144	3	43
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 ++k++rr ++NReAAr+sR RKka++++Le+ +L + + Peaxi162Scf00160g01615.1 104 SDKVQRRQAQNREAARKSRMRKKAYVQQLETSRLKLATLEM 144 68****************************86555555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0016	102	162	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.9E-8	104	148	No hit	No description
PROSITE profile	PS50217	9.105	104	148	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-7	105	144	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.5E-7	106	141	No hit	No description
PROSITE pattern	PS00036	0	109	124	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.1E-29	192	264	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MDFPTGIGVR RSFSAIKEGR WLIRGSMNMS SPSTQFAPAR MGIYEPFHQM SVWEDTFRGD 60 IMPGSGACMV AQPNDRADDK SGYTSSEQLI PSGSEDNLAG KSISDKVQRR QAQNREAARK 120 SRMRKKAYVQ QLETSRLKLA TLEMELERAR QQGLYVLGSN GNMGLGATIN PGIAAFEMEY 180 SLWVEEQQKK NTELRNVLQS HVSDMELQLL VETVLSHYYN LFRMKADAAK ADVFYLMSGM 240 WRTSVERFFI WIGGFKPSEL INVVPGAFSL LFNLVVVMPQ LEPLTDQQIV KICNLRHCCQ 300 QAEDALTQGM DKLQQTLAQN ILSMSTGMGS YSSQMVSSME KLEALESFVN QADHLRQQTL 360 QQMSIILTIR QAARGLLAFG EYLQRLRALS SLWAARPREP T

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MDFPTGIGVR RSFSAIKEGR WLIRGSMNMS SPSTQFAPAR MGIYEPFHQM SVWEDTFRGD  60
IMPGSGACMV AQPNDRADDK SGYTSSEQLI PSGSEDNLAG KSISDKVQRR QAQNREAARK  120
SRMRKKAYVQ QLETSRLKLA TLEMELERAR QQGLYVLGSN GNMGLGATIN PGIAAFEMEY  180
SLWVEEQQKK NTELRNVLQS HVSDMELQLL VETVLSHYYN LFRMKADAAK ADVFYLMSGM  240
WRTSVERFFI WIGGFKPSEL INVVPGAFSL LFNLVVVMPQ LEPLTDQQIV KICNLRHCCQ  300
QAEDALTQGM DKLQQTLAQN ILSMSTGMGS YSSQMVSSME KLEALESFVN QADHLRQQTL  360
QQMSIILTIR QAARGLLAFG EYLQRLRALS SLWAARPREP T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269\|PubMed:12953119}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019236435.1	0.0	PREDICTED: transcription factor TGA1-like
Swissprot	Q93ZE2	1e-147	TGA7_ARATH; Transcription factor TGA7
TrEMBL	A0A1J6K1J9	0.0	A0A1J6K1J9_NICAT; Transcription factor tga1
STRING	XP_009588814.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA780	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-140	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]