PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00158g00171.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 360aa MW: 39620.8 Da PI: 8.08

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00158g00171.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.1e-39	38	98	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ l+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + Peaxi162Scf00158g00171.1 38 QQQPLNCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 98 68999*****************************************************875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.8E-33	40	96	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.376	42	96	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-28	42	96	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	44	80	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence Send to blast
MLRDCEKMID EKNLMMASNG GSDIEKPIQD SQQQQQQQQQ PLNCPRCDSA NTKFCYYNNY 60 SLSQPRHFCK ACKRYWTRGG TLRNVPVGGG CRKNKRIKRP SVNSSTNDHI APNSISVATT 120 TKPSYQNNIH GATHNIDLSS TITSNHLTPL FYGLTNGSSD HLNIPFSRLF NSRVLSKLDE 180 GHVYSLAADN IPGLMDRRAG LVSSSEVLMG ENYGHGFNST KQIQDVVTTS SSSLLSSYPM 240 FGSSSSTSNS TSTSTMASLI ASSFQQQKFI SNSNNFHSLV PYEELQMSGN NNVEGGSGIM 300 LKEEKTEGGN GQNRLNWNNL SNHQSQIHEQ IISSNDPSIP WNGAWFDPSN MGSNSVPSLI

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence Send to blast

MLRDCEKMID EKNLMMASNG GSDIEKPIQD SQQQQQQQQQ PLNCPRCDSA NTKFCYYNNY  60
SLSQPRHFCK ACKRYWTRGG TLRNVPVGGG CRKNKRIKRP SVNSSTNDHI APNSISVATT  120
TKPSYQNNIH GATHNIDLSS TITSNHLTPL FYGLTNGSSD HLNIPFSRLF NSRVLSKLDE  180
GHVYSLAADN IPGLMDRRAG LVSSSEVLMG ENYGHGFNST KQIQDVVTTS SSSLLSSYPM  240
FGSSSSTSNS TSTSTMASLI ASSFQQQKFI SNSNNFHSLV PYEELQMSGN NNVEGGSGIM  300
LKEEKTEGGN GQNRLNWNNL SNHQSQIHEQ IISSNDPSIP WNGAWFDPSN MGSNSVPSLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016441727.1	1e-154	PREDICTED: dof zinc finger protein DOF1.4-like
TrEMBL	A0A1S3XPZ3	1e-153	A0A1S3XPZ3_TOBAC; dof zinc finger protein DOF1.4-like
STRING	XP_009623141.1	1e-153	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	2e-36	Dof family protein