PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00089g00723.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 578aa    MW: 65742.8 Da    PI: 7.8289
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00089g00723.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.46.4e-19761531699
                               EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                 lp +fa+ +++   ++++  led+sg++W+v++  +++sg+  +++GW +F++++gL +gD +vF++++ + f   v++f +
  Peaxi162Scf00089g00723.1  76 QFLPPRFARLNSNL--TNRKTYLEDSSGQRWRVTV--CNHSGSLAIQEGWPKFCSEHGLGVGDLLVFHYVQGQHF--IVQIFGH 153
                               579*****999655..45589**************..********************************987777..9999976 PP
2B331.62.8e-104795611394
                               TT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
                        B3  13 sgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 
                               ++ l lp +  +++  + +k +   + l+ ++ r W   +  r +sg+ vlt  Wk+F  a +Lk gD ++F+l+++   +f+l+
  Peaxi162Scf00089g00723.1 479 RDFLQLPESW-RKYlkKRVKMGRWIIYLRGPDKRPWATFY--RSRSGKEVLTHRWKDFTAAYDLKPGDKCLFQLENQleCTFNLH 560
                               5566777666.466676677778899**************..9999999************************997653444444 PP

                               E CS
                        B3  94 v 94 
                               v
  Peaxi162Scf00089g00723.1 561 V 561
                               4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.84E-1964156IPR015300DNA-binding pseudobarrel domain
SMARTSM010194.0E-1266154IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-1867156IPR015300DNA-binding pseudobarrel domain
PfamPF023627.1E-1776152IPR003340B3 DNA binding domain
CDDcd100171.97E-1578151No hitNo description
PROSITE profilePS5086313.01478154IPR003340B3 DNA binding domain
PROSITE profilePS508639.404467567IPR003340B3 DNA binding domain
SMARTSM010190.0022468567IPR003340B3 DNA binding domain
CDDcd100172.93E-9476562No hitNo description
PfamPF023621.6E-7479561IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.9E-10480561IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.28E-11480556IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MECENEACDE CKRNCQLIHG KRDSFFKMMI GKEFSKIMYS ERLPRIWLNT CFFSLAFELC  60
IDLWHFLVII FANSFQFLPP RFARLNSNLT NRKTYLEDSS GQRWRVTVCN HSGSLAIQEG  120
WPKFCSEHGL GVGDLLVFHY VQGQHFIVQI FGHTGCEKIT HPSDICKGQK RARTYPEATS  180
QDELLQTTDI NSTNKKSKTY SASESEKVTH QSHITKFAPN IDANSGKEKL VHPAVNVDES  240
FCMIDRDGQC DQGDDRLCLH LSSFEMPANK PLAEGTNSLL KGDNGSSNHV EAKLRIQAEK  300
LSPTFDSEIL RNDKIIGRPV EDIPPLSQKD ENDHSTNVMS SSFLKPAENS SRSDDLSNVN  360
KHQNPRMSTF ESAKKTRLIK KELVETATEA DCPPKKIRLV KKELVETAIE ADCPPKKIRL  420
VKKEPGEAAT EAYCPARALS DSGKEPRNGK DKVIKSEPAD SGETPSLISY SILQEVDGRD  480
FLQLPESWRK YLKKRVKMGR WIIYLRGPDK RPWATFYRSR SGKEVLTHRW KDFTAAYDLK  540
PGDKCLFQLE NQLECTFNLH VCFLFSEAKE VCIAEIPV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009616983.10.0PREDICTED: uncharacterized protein LOC104109401 isoform X4
TrEMBLA0A1J6IKJ00.0A0A1J6IKJ0_NICAT; B3 domain-containing protein
STRINGXP_009616981.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22102352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.17e-08B3 family protein