PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00074g01736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | WRKY | ||||||||
Protein Properties | Length: 275aa MW: 30930.5 Da PI: 4.4076 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 43.9 | 4.9e-14 | 113 | 152 | 21 | 59 |
-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 rsYYrC+s+ gC ++k+ve+s ++p +++tY+ eHnh+ Peaxi162Scf00074g01736.1 113 KRSYYRCSSSkGCLARKQVEQSCNEPGNFIVTYTAEHNHS 152 69******998****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 9.4E-8 | 110 | 153 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-12 | 111 | 154 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.4E-15 | 112 | 154 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.3E-12 | 112 | 151 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.131 | 114 | 154 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MAQCSDWCLQ AVVKGSSNID SKSCNFSLLD FQESEYLTFS EMKMEVVGDE LEELYKPFYP 60 VDGQNIVMAS SISCPKEPKE EKIEEIFHQQ QGCINESFSL NMAGAVYVPK YKKRSYYRCS 120 SSKGCLARKQ VEQSCNEPGN FIVTYTAEHN HSQPTRRNSL AGTIKTKFPT SKSPVNSGSP 180 KMLQPKISSP QYGSPTTLLN VEPNVHKDEF PEIEINQENI IIGDYNEEIR MFEGSDENDY 240 VSVQDMFDGD FFAGLEDIDG FNSSFGCNIS MSPFS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009764282.1 | 1e-103 | PREDICTED: probable WRKY transcription factor 29 | ||||
Refseq | XP_016483102.1 | 1e-103 | PREDICTED: probable WRKY transcription factor 29 | ||||
TrEMBL | A0A1S4B2E5 | 1e-102 | A0A1S4B2E5_TOBAC; probable WRKY transcription factor 29 | ||||
TrEMBL | A0A1U7V812 | 1e-102 | A0A1U7V812_NICSY; probable WRKY transcription factor 29 | ||||
STRING | XP_009764282.1 | 1e-102 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5781 | 23 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-15 | WRKY family protein |