PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00073g02339.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 300aa    MW: 34748.8 Da    PI: 6.9449
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00073g02339.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.81.9e-22130190259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dg++WrKYGqK++ +s++pr Y+rCt++   +C+++k+v+  +e+p + ++tY g+H+++
  Peaxi162Scf00073g02339.1 130 EDGCAWRKYGQKNILNSKYPRCYFRCTHKynqECRATKQVQIIQENPIIYHTTYFGHHTCN 190
                               8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-22120191IPR003657WRKY domain
PROSITE profilePS5081116.926124192IPR003657WRKY domain
SuperFamilySSF1182903.27E-23125190IPR003657WRKY domain
SMARTSM007746.2E-35129191IPR003657WRKY domain
PfamPF031064.5E-22130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEKPLEECHE NPRKRLINEL LIEGKSFATQ LQTLLQKPII ADHGSVSADE LLVKIWSSFT  60
QAITEVNSLG SKGFFQIEEV DQSDSSDRKS KDSSSEFTKK KNKLVGKDRR GCYKRRKTSD  120
SRIRESATIE DGCAWRKYGQ KNILNSKYPR CYFRCTHKYN QECRATKQVQ IIQENPIIYH  180
TTYFGHHTCN SVKIPKHEII TSQESHHSMV YYPPFEVKPK FFSSETHDST VKLEEESNKV  240
QSDDDVSSTM DSNLWQDFMP SSPSARSTMT DHSSYFDQVI IPSYVEDFGK FGDFHFEEFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-20129189868OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198116KKKNKLVGKDRRGCYKRRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312512.11e-137probable WRKY transcription factor 70
SwissprotK4BIZ96e-97WRK70_SOLLC; WRKY DNA-binding transcription factor 70
TrEMBLA0A2U3T9U91e-136A0A2U3T9U9_TOBAC; WRKY1 transcription factor
STRINGXP_009793213.11e-136(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-38WRKY DNA-binding protein 70
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]