PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00072g00811.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 194aa MW: 22580.5 Da PI: 6.6327

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00072g00811.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.9e-20	52	138	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fY +YA++ svr+s+ ++s+++++i+ ++fvCskeg+ ++++ + ++r++ et g k ++ ++++++g w+vt+l+++H Peaxi162Scf00072g00811.1 52 EFYLNYAHRSSSSVRRSRISRSRKDNSIIGQQFVCSKEGFCSKKSLE---SNRQQDETIEGYKVMIYLSNKEEGLWMVTRLVSDH 133 6**************************************999877...888999999********************** PP FAR1 86 nHela 90 nHel+ Peaxi162Scf00072g00811.1 134 NHELS 138 *97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.6E-17	52	138	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
DKPETSNLPN QNEEGTGAAL EELESDMNVT IDEEPREPYI GMDFPSPDIA FEFYLNYAHR 60 SSSSVRRSRI SRSRKDNSII GQQFVCSKEG FCSKKSLESN RQQDETIEGY KVMIYLSNKE 120 EGLWMVTRLV SDHNHELSSP HSKKFLRSKR KKSEAQKISL IYLIHLVFVQ QYQPYPDHFM 180 DKMVIVVTYI QPHL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019068484.1	1e-64	protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A3Q7EE03	5e-59	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	6e-16	FAR1 family protein