PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00072g00039.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 300aa MW: 33185.5 Da PI: 7.3252

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00072g00039.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	9.8e-40	42	100	5	63
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss Peaxi162Scf00072g00039.1 42 PINCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 100 689****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-28	37	97	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.4E-33	43	97	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.413	43	97	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	45	81	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MDPSSGQHHH QELSSQTLES MLVSTKPQQQ DFKKPRPAEQ LPINCPRCDS TNTKFCYYNN 60 YSLSQPRYFC KSCRRYWTKG GTLRNVPVGG GCRKNKRSSS KSTSQDHSIN TSPNNPISSL 120 TQMSYDSSDL TLAFASLQKQ TSGHLGIHEN HNISMMCNGN TGTSADFLES IKGGSFLQNQ 180 NGFHHQNLYY GIGSNGDIGN VENDGNYMGV NVSEEMGNMH YDQEMSSGAT TTTTATAVTT 240 VKQEMCNMAR EGHNDNRVLW GFPWQINGDG NNTMGDFDSS RRIWNGVGGP SWHGLLNSPL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009622795.1	1e-143	PREDICTED: dof zinc finger protein DOF2.1-like
Refseq	XP_016492247.1	1e-143	PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBL	A0A1S4BTN8	1e-142	A0A1S4BTN8_TOBAC; dof zinc finger protein DOF2.1-like
STRING	XP_009622795.1	1e-142	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	1e-46	Dof family protein