PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00071g01051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 115aa MW: 13299.3 Da PI: 8.4845 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.5 | 1.1e-10 | 45 | 88 | 1 | 48 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 +g+ GVr + g++ AeI+dp++ +k ++lg+f taeeA a Peaxi162Scf00071g01051.1 45 TGFIGVRKAR-GGKFGAEIKDPTT---KKCIWLGTFNTAEEASNAFLL 88 6899**9655.9*********965...5**************998655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.85E-14 | 45 | 86 | No hit | No description |
SuperFamily | SSF54171 | 1.9E-11 | 46 | 96 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 13.05 | 46 | 103 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.2E-4 | 46 | 92 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-12 | 47 | 86 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence Send to blast |
METDQQMLVE EKEKEEKEEE TNKNQTENKV KLLSPFQQKH MRNATGFIGV RKARGGKFGA 60 EIKDPTTKKC IWLGTFNTAE EASNAFLLKK QEFLATHQFV KMPLMLVVYF ILDSN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018624049.1 | 6e-14 | PREDICTED: uncharacterized protein LOC104089342 | ||||
TrEMBL | A0A1S3ZEC4 | 2e-12 | A0A1S3ZEC4_TOBAC; uncharacterized protein LOC107785831 | ||||
STRING | XP_009592504.1 | 3e-13 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4341 | 12 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 8e-14 | erf domain protein 9 |