PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g01047.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 490aa    MW: 54759.1 Da    PI: 9.9693
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g01047.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.53.7e-094182247
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47
                              g  GV  +k +g++ A Irdp     + k+++lg+f taeeA  a  
  Peaxi162Scf00071g01047.1 41 GLIGVNKRK-NGKFGAAIRDPI----TkKTVWLGTFNTAEEASNAFL 82
                              667***999.8*********72....36**************99865 PP
2AP227.67.5e-09285323345
                       AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAaka 45 
                               + GVr ++ +gr+ +eI+d       +k ++lg f+taeeA +a
  Peaxi162Scf00071g01047.1 285 ILGVRKRE-SGRYSSEICDrI----SNKLIWLGMFDTAEEASQA 323
                               67***999.7*********33....24**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.2483498IPR001471AP2/ERF domain
CDDcd000183.01E-123481No hitNo description
SuperFamilySSF541711.63E-104192IPR016177DNA-binding domain
SMARTSM003801.6E-44499IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-114481IPR001471AP2/ERF domain
PROSITE profilePS5103210.53498160IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-8102146IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.0E-7106141IPR001471AP2/ERF domain
PROSITE profilePS5103211.654284344IPR001471AP2/ERF domain
SMARTSM003803.2E-4284350IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-9286332IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.1E-11287333IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
METNQQLLVE EKEKQETNKK QTENKVKFTP FQHNYRGNVT GLIGVNKRKN GKFGAAIRDP  60
ITKKTVWLGT FNTAEEASNA FLLKKQEFLA TLQSVNKPSK GLLGTQRLKS GRYGARITDP  120
FSHKEEWLGT FDTVEDASQA YLSKKSEFEK LVKANQGKEP IICVESSKEA LCLMANVHGT  180
KSSNGCIVNI ATSHPKAKRS LLGIRRQKNG WNVDVVKDLI RSKKVLLGTS DTVVADSETY  240
FSKKSEFEKL GKGSKENKPK NCDHINDQTI YVGRNKTNSQ KTTPILGVRK RESGRYSSEI  300
CDRISNKLIW LGMFDTAEEA SQAFQSKKLE IQKLVNAKQQ CNLKTHSSAR AKQDGKEKLV  360
DAKQGHETVH EGFQLESGCG ASSLETDVPM SNSFNGGRIE SHEISHSMGV QKRKLGKQTS  420
EILLKTLGTV EEAFNAYQCK KSGFQISKKA ELQTYKPTDS SAGENQVGKE DEDLWKGQWV  480
QLPEIIIGMW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771233.11e-128PREDICTED: uncharacterized protein LOC104221795
TrEMBLA0A1U7VXX51e-127A0A1U7VXX5_NICSY; uncharacterized protein LOC104221795
STRINGXP_009771233.11e-128(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.12e-10ethylene responsive element binding factor 4