PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g01046.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 435aa    MW: 47840.7 Da    PI: 10.0418
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g01046.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.29.6e-09646246
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaa 46
                              +y+GVr  k  g++ A I+dp     + +r++lg+f taeeA  a+
  Peaxi162Scf00071g01046.1  6 KYTGVRKTK-GGKFYALIKDPI----TkRRVRLGTFNTAEEASNAY 46
                              8*****888.9*********72....36****************99 PP
2AP239.31.6e-12117161553
                       AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                               GVr+ k +gr+ A+Irdp    ++ kr++lg+f+t eeA +a+   + ++
  Peaxi162Scf00071g01046.1 117 GVRRQK-SGRFTARIRDP----IShKRVWLGTFDTVEEASEAYFSKKSEF 161
                               9**888.7*********8....247******************8776665 PP
3AP236.11.6e-11214262153
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                               +++ GVr +k +gr+ +eI+ p    ++ kr++lg+f++aeeA +a+   ++++
  Peaxi162Scf00071g01046.1 214 THFVGVRKRK-SGRFSSEIKNP----ISkKRIYLGTFDSAEEASQAYQSKKLEF 262
                               5799***999.7******9997....246******************8777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.29E-12546No hitNo description
PROSITE profilePS5103212.589663IPR001471AP2/ERF domain
SMARTSM003802.1E-4663IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-11646IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-10654IPR016177DNA-binding domain
PRINTSPR003671.5E-5718IPR001471AP2/ERF domain
PROSITE profilePS5103213.92114173IPR001471AP2/ERF domain
SMARTSM003801.1E-5116162IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-11117159IPR016177DNA-binding domain
CDDcd000186.42E-15117154No hitNo description
Gene3DG3DSA:3.30.730.102.5E-13117154IPR001471AP2/ERF domain
PfamPF008472.1E-6117163IPR001471AP2/ERF domain
PRINTSPR003671.5E-5137153IPR001471AP2/ERF domain
CDDcd000182.62E-15214255No hitNo description
SMARTSM003801.4E-11215269IPR001471AP2/ERF domain
PROSITE profilePS5103215.04215275IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-15215263IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-11215263IPR016177DNA-binding domain
PfamPF008476.8E-6215261IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MENEAKYTGV RKTKGGKFYA LIKDPITKRR VRLGTFNTAE EASNAYLLRK QVFLATPPSV  60
NKRFNSNMDF TTGKEPFISV KSSCSMANVH GTESSSGCIS TTVTSNPKAK RNLLGLGVRR  120
QKSGRFTARI RDPISHKRVW LGTFDTVEEA SEAYFSKKSE FEKLSKGIKE NKPKHCDQIQ  180
PESPVGASLS VDIDHTLNVT SVGGNKTISS HETTHFVGVR KRKSGRFSSE IKNPISKKRI  240
YLGTFDSAEE ASQAYQSKKL EFKKLVEAKQ QCNRQTHSSA LVEQDGKEKL VHAKQGHETV  300
TCEGFQPESS RGASFSEIEV PVSNSSSGGS DRRIDSNIIS HSLGVQRRNS GKSTSGILSG  360
TVGTAEEAFS AYQCKRTKKA ELQSDMPTDS SAGENQEGED LWKGKWVQLP GNKEVNISLK  420
LGVPIIDNYG SLLDE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771233.11e-140PREDICTED: uncharacterized protein LOC104221795
TrEMBLA0A1U7VXX51e-139A0A1U7VXX5_NICSY; uncharacterized protein LOC104221795
STRINGXP_009771233.11e-139(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.19e-15erf domain protein 9