PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00052g00335.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 404aa    MW: 42909.1 Da    PI: 7.2553
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00052g00335.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.12.5e-20300362163
                               XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L +eN++L+ el++l+ e ++l +++
  Peaxi162Scf00052g00335.1 300 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENSSLRAELSRLRSEHDQLVAQN 362
                               89*****************************************************99997776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.0E-29196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.5E-51135267No hitNo description
Gene3DG3DSA:1.20.5.1708.2E-18293360No hitNo description
PfamPF001701.6E-18300362IPR004827Basic-leucine zipper domain
SMARTSM003386.2E-21300364IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288302365IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.63E-11303359No hitNo description
CDDcd147021.08E-23305356No hitNo description
PROSITE patternPS000360307322IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MGSSDIDKSS KEAKESKEPK PPNSQVSSTA TGTVNPEWSG YQGYPPMPPH GFLASSPQAH  60
PYMWGVQHLM PPYGTPPHPY VAMYPHGGIY AHPSMPPGSY PFSPFAMPSP NGIAEAAVNN  120
SGNAEVDGKS SEGKEKLPIK RSKGSLGSLN MITGKHNEHG KTSGASANGA YSKSGESGSE  180
GSSEGSDANS QNETPMKSAG RQDSADASQN GNSAHSSQNG GTSAPHSLIN QTMPIMPIAA  240
AGGIPGPTTN LNIGMDYWSA AASPSIPAIH GKVPSASVAG GMVTAGSRDI VQSQMWLQDE  300
RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEVLNEE NSSLRAELSR LRSEHDQLVA  360
QNASLKERLG EVPGRDDPRP SRNDIHLGKD TQHSSQTEST QDGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316322RRSRLRK
2316323RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0139800.0BT013980.1 Lycopersicon esculentum clone 133025R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016508279.10.0PREDICTED: bZIP transcription factor 16-like
RefseqXP_016508280.10.0PREDICTED: bZIP transcription factor 16-like
SwissprotQ501B21e-165BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A1S4D4A90.0A0A1S4D4A9_TOBAC; bZIP transcription factor 16-like
STRINGSolyc08g076100.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-140basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]