PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00045g01458.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 353aa    MW: 38831.1 Da    PI: 6.1823
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00045g01458.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.78.2e-16183238358
                               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                               ++kr rr ++NRe+ArrsR+RK+a ++ Le+ v++  +eN++L k+l   +++++ 
  Peaxi162Scf00045g01458.1 183 DIKRIRRQASNRESARRSRRRKQAHLADLETQVEQYRGENDTLFKQLADATQQYKD 238
                               68******************************************888887777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-12180237No hitNo description
SMARTSM003384.8E-18181245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.898183235IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.53E-11184236No hitNo description
PfamPF001705.9E-13184240IPR004827Basic-leucine zipper domain
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
CDDcd147021.38E-6199236No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEKKMANFAS RDMKKSPSLL ALEEYLNHSR IYGEDGRLIG HDMVNPKTGD HGFGGSDHHK  60
ITNNNNINDH HDNNINVHAQ LFGDICSVAP SFTMRNQEII SDFSNCALAD KPQWSPNPTT  120
KQSSISATVD SQSSICAGSP TPTIIMPKVR DNQAMGATSG SYSDDDDLEG EVGPCEQSME  180
PMDIKRIRRQ ASNRESARRS RRRKQAHLAD LETQVEQYRG ENDTLFKQLA DATQQYKDAL  240
TNNRVLKSDV EALRAKVKLA EDMVTRGSLT SSLSHLLQNY LNTPQSLGTN NASMCRLDNV  300
SPTITVPGED SWGTISSQTP MIGAENNVNN ALINRNFKNG AMSDAVSCVS DVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197204RRSRRRKQ
2199204SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT-3'. May be involved in the regulation of genes expressed during seed development (PubMed:7919992). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:7919992}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590020.11e-166PREDICTED: basic leucine zipper 9
SwissprotQ6ETX02e-61RSBZ3_ORYSJ; bZIP transcription factor RISBZ3
TrEMBLA0A1S3YCD11e-161A0A1S3YCD1_TOBAC; basic leucine zipper 9-like
STRINGXP_009590020.11e-166(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81392229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-43basic leucine zipper 9
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  3. Izawa T,Foster R,Nakajima M,Shimamoto K,Chua NH
    The rice bZIP transcriptional activator RITA-1 is highly expressed during seed development.
    Plant Cell, 1994. 6(9): p. 1277-87
    [PMID:7919992]