PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00045g00325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 205aa MW: 22070.3 Da PI: 7.6815 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68.1 | 1.4e-21 | 102 | 164 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ e+++l +++ Peaxi162Scf00045g00325.1 102 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENASLRAEVNRIRTEYEQLLAQN 164 89*********************************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF16596 | 7.2E-17 | 7 | 69 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-19 | 95 | 163 | No hit | No description |
SMART | SM00338 | 1.2E-21 | 102 | 166 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-20 | 102 | 164 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.128 | 104 | 167 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-12 | 105 | 162 | No hit | No description |
CDD | cd14702 | 3.20E-20 | 107 | 157 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 109 | 124 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MPPATADTSQ NGNAAHGSQS GGSGPHSMIN QTMTIAPMTA AGAAGVPGPT TNLNIGMDYW 60 GAATSASIPA IHGNVPSASV AGGLVTAGSR DSIQSQMWVQ DERELKRQRR KQSNRESARR 120 SRLRKQAECD ELAQRAEVLK EENASLRAEV NRIRTEYEQL LAQNVSLKER LGDVPVEDDP 180 RTSRDQLLGK KAQHSAETES RQGDQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 124 | RRSRLRK |
2 | 118 | 125 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009625983.1 | 1e-122 | PREDICTED: bZIP transcription factor 16 | ||||
Refseq | XP_016475751.1 | 1e-122 | PREDICTED: bZIP transcription factor 16-like | ||||
Swissprot | Q501B2 | 4e-66 | BZP16_ARATH; bZIP transcription factor 16 | ||||
TrEMBL | A0A1S4AGH5 | 1e-121 | A0A1S4AGH5_TOBAC; bZIP transcription factor 16-like | ||||
STRING | XP_009625983.1 | 1e-121 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3065 | 24 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 3e-55 | basic region/leucine zipper transcription factor 16 |
Publications ? help Back to Top | |||
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