PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00038g00833.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 138aa    MW: 15656 Da    PI: 10.2579
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00038g00833.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-194292256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               y+GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++ge
  Peaxi162Scf00038g00833.1 42 VYRGVRMRS-WGKWVSEIREPKK---KSRIWLGTYPTAEMAARAHDVAALSIKGE 92
                              59****998.**********854...6************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.1E-134292IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2242100IPR016177DNA-binding domain
PROSITE profilePS5103223.5384299IPR001471AP2/ERF domain
SMARTSM003808.5E-3842105IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-3242100IPR001471AP2/ERF domain
CDDcd000184.22E-3243101No hitNo description
PRINTSPR003678.3E-114354IPR001471AP2/ERF domain
PRINTSPR003678.3E-116581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MPNGHMNESY VNDDDVNEQE ERKRAAKRKR ETVKSESRVG QVYRGVRMRS WGKWVSEIRE  60
PKKKSRIWLG TYPTAEMAAR AHDVAALSIK GESAILNFPN LVGSLPRPGC CIRHGGHQMT  120
VIFVSLIPSS FETLKWAC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-19431001573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016474916.11e-47PREDICTED: ethylene-responsive transcription factor TINY-like
RefseqXP_018622706.11e-47PREDICTED: ethylene-responsive transcription factor TINY-like
SwissprotQ9M2105e-39ERF35_ARATH; Ethylene-responsive transcription factor ERF035
TrEMBLA0A1S4AE583e-46A0A1S4AE58_TOBAC; ethylene-responsive transcription factor TINY-like
STRINGXP_009588133.15e-47(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.14e-39ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]