PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00026g00203.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 550aa    MW: 62800 Da    PI: 8.8281
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00026g00203.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019483505123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               +kCp+C++ F++   L  H r+H
  Peaxi162Scf00026g00203.1 483 HKCPYCDRIFKSGQALGGHKRSH 505
                               79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003553.6931IPR015880Zinc finger, C2H2-like
PfamPF139121.4E-6931IPR007087Zinc finger, C2H2
PROSITE profilePS501578.538936IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SMARTSM003550.2394116IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.72394121IPR007087Zinc finger, C2H2
PfamPF139129.7E-796118IPR007087Zinc finger, C2H2
PROSITE patternPS00028096116IPR007087Zinc finger, C2H2
SuperFamilySSF576671.05E-6395419No hitNo description
PROSITE profilePS501578.808397419IPR007087Zinc finger, C2H2
SMARTSM003557.6397419IPR015880Zinc finger, C2H2-like
PfamPF139129.5E-8397421IPR007087Zinc finger, C2H2
PROSITE patternPS000280399419IPR007087Zinc finger, C2H2
SuperFamilySSF576671.05E-6478505No hitNo description
SMARTSM003550.015483505IPR015880Zinc finger, C2H2-like
PfamPF139121.2E-9483505IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.159483513IPR007087Zinc finger, C2H2
PROSITE patternPS000280485505IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MEEDQVMKFV CKLCYKRYPC GKSLGGHMRS HVFANSAEFE EKVEEANMKK VPFWSSTSNG  60
KNCKLGENSG YGLRENPKKT WRAEDSNSPL PQEKVCQQCG KVFQSMKALC GHMACHSEKD  120
RGLKDDSNSW TSESKKLVMI DSNSDTEAEE LISYKYRSKT KRYKKIVVKS SICKVNNNNN  180
SNYNYSSSVS EIDHELEQEE VAKCLMMLSR DSWIWNGVNS VVESSDNNSV VLETKSSSTD  240
MRNARKNSLK CVYNRDEKPR TKKREGRNLK VDMLEADTQS ENSDSDYFLG ENQKVESDGS  300
VEGFRGNGNY KSSTSRMSLN AWLNERRTDD KKGLNRIKRY LTESRKDLSK KYEQDDYGTA  360
SNLDKYESRR GTTDQYNHPE IGNESKKINL SVKKRKYECL NCKKTFGSYQ ALGGHRPCHK  420
KFNDYSESAY ETGENSLAAE NDPKCIRIGK HKESFSNKKQ AVSAQDLSYV PEKKVKPKKS  480
KGHKCPYCDR IFKSGQALGG HKRSHFIHHG GEENLNQSSA VKQNVADLLD LNLPAPVDDE  540
DDEYARFMSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009631793.10.0PREDICTED: uncharacterized protein LOC104121485 isoform X1
RefseqXP_009631797.10.0PREDICTED: uncharacterized protein LOC104121485 isoform X1
RefseqXP_016476437.10.0PREDICTED: uncharacterized protein LOC107798024 isoform X1
TrEMBLA0A1S4AIC00.0A0A1S4AIC0_TOBAC; uncharacterized protein LOC107798024 isoform X1
STRINGXP_009631793.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-54C2H2-like zinc finger protein