PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00020g02019.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 200aa    MW: 23300.5 Da    PI: 8.4105
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00020g02019.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.41.8e-14101154558
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                               +++rr+++NRe+ArrsR RK+  ++eL   v  L +eN++L ++l++ ++  ++
  Peaxi162Scf00020g02019.1 101 RKQRRMISNRESARRSRMRKQRHLDELWAQVVWLRNENHQLLEKLNHASESHDQ 154
                               689***************************************999988876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-1497161IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.38199162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11101173No hitNo description
SuperFamilySSF579598.75E-13101150No hitNo description
PfamPF001702.7E-12101159IPR004827Basic-leucine zipper domain
CDDcd147023.30E-17102153No hitNo description
PROSITE patternPS000360104119IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MKHKSIEVTS HNRACLPKPH FPILLRHRLL SKKRHGLTGL ANAELVCLDH PSCQINRLLN  60
PLYQLQITPQ VQELNPQLTC FNSNSTSDEA DEQQMSLINE RKQRRMISNR ESARRSRMRK  120
QRHLDELWAQ VVWLRNENHQ LLEKLNHASE SHDQTLQENA QLKKEASELR QMITDMHLTS  180
PCPSLRALDD EHCSGLSQNE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113120RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754411e-154HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016483028.16e-91PREDICTED: uncharacterized protein LOC107803773
RefseqXP_019265101.12e-91PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC21e-40BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A1S4B2L61e-89A0A1S4B2L6_TOBAC; uncharacterized protein LOC107803773
TrEMBLA0A314L2U25e-90A0A314L2U2_NICAT; Basic leucine zipper 43
STRINGXP_009603686.13e-90(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-50basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]