PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00016g02842.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 272aa    MW: 30067.4 Da    PI: 7.9254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00016g02842.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-111972371055
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  Peaxi162Scf00016g02842.1 197 RKRRERINERLRILQTLVPNG-----TKVDISTMLEEAVQYVKFLQ 237
                               9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-14187252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.281187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-12192246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-11193242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.77E-12196241No hitNo description
PfamPF000103.0E-8197237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MEPVGAMSEA EWSSLSGTCP TEEADFMAQL FGSCPNEQPS SSNVGLPIFW TSHDQSSMNM  60
GSGTSQVSMY NSSDEPNNSM YIYSSQGISN SDGSSILYPP PSHGSYYRKS SKKRSRLPVD  120
IPKNKRSTKP KKNMKTADEN GKDNNNVLHR QSSFSCCSED ESNFSYDLNG LTSSSNSKGK  180
SRASRGSATD PQSLYARKRR ERINERLRIL QTLVPNGTKV DISTMLEEAV QYVKFLQLQI  240
KLLSSDDLWM YSPIAYNGMD LGLDLKLGAP NS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016582353.11e-118PREDICTED: transcription factor bHLH84-like
SwissprotQ7XHI94e-65BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A2G2V7281e-117A0A2G2V728_CAPBA; Transcription factor
TrEMBLA0A2G3C4751e-118A0A2G3C475_CAPCH; Transcription factor bHLH54
STRINGSolyc01g107140.1.11e-112(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-40bHLH family protein