PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00016g00193.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Protein Properties

Length: 795aa MW: 88949.9 Da PI: 4.7344

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00016g00193.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.3	2.5e-17	26	116	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k ++ps+v+ +l +pkkf++++ +k + t +l de+g+++ k+ ++k++ l++GW++F a+ L egD++vF+l+ Peaxi162Scf00016g00193.1 26 FIKYMLPSHVTGGFWLGFPKKFCASYL-PK-HDDTAVLVDEDGKEYATKYLVEKNG----LSGGWRGFSIAHSLLEGDVLVFQLI 104 8999********************4.33.3459***********777777....*********************** PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + +f +v ++r+ Peaxi162Scf00016g00193.1 105 QACKF--KVYIVRA 116 99999..8888775 PP
2	B3	51.9	1.4e-16	439	529	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k ++ps+v+ +l++pk+f++ h ++k+ + t++l de+ ++++ k+ ++k++ l++GW++F a+ L egD++vF+l+ Peaxi162Scf00016g00193.1 439 FVKYMLPSHVTGGFWLSFPKPFCDLH-LPKH-DDTVVLVDENEEEYSTKYLIDKNG----LSAGWRGFSIAHSLLEGDVLVFQLI 517 8999*****************888.4443.459***********889998....*********************** PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + +f +v ++r+ Peaxi162Scf00016g00193.1 518 QPCKF--KVYIIRE 529 98888..8888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	5.2E-20	20	117	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	1.02E-23	20	117	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	2.42E-25	24	115	No hit	No description
PROSITE profile	PS50863	12.576	26	117	IPR003340	B3 DNA binding domain
Pfam	PF02362	1.6E-15	26	116	IPR003340	B3 DNA binding domain
SMART	SM01019	5.7E-22	26	117	IPR003340	B3 DNA binding domain
Pfam	PF05266	8.1E-10	284	390	IPR007930	Protein of unknown function DUF724
Gene3D	G3DSA:2.40.330.10	5.6E-19	433	530	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	1.75E-23	433	529	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	1.58E-25	437	528	No hit	No description
PROSITE profile	PS50863	11.998	439	530	IPR003340	B3 DNA binding domain
Pfam	PF02362	2.8E-14	439	529	IPR003340	B3 DNA binding domain
SMART	SM01019	1.4E-21	439	530	IPR003340	B3 DNA binding domain
Pfam	PF05266	3.2E-9	674	779	IPR007930	Protein of unknown function DUF724

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence Send to blast
MVDANSSAML RAEEVQANLP SQFPSFIKYM LPSHVTGGFW LGFPKKFCAS YLPKHDDTAV 60 LVDEDGKEYA TKYLVEKNGL SGGWRGFSIA HSLLEGDVLV FQLIQACKFK VYIVRANSLA 120 EIDGAISLLN LDFHARPIKS DEDMKICEAK EETFLEPSAL DIHQDDKQEV ILISDSDHGS 180 SALDIHQDDK QEVILISDSD HDTATEHCGN DSDNGSEVLE GIRFSESKID FKDVKDFSGF 240 NILVDGLIID SEIPAHIRTK YYELCSTQNS FLHDHLFGGL NCKLAAGMIT ETVNIADAIR 300 ASKISIPREY LETWDNTLKG FECLGMEVGF LRARLNKLVS MSSESKQILE TKRNELAEAK 360 EELKNLEAKL SNVKQVIKNL DSEIEALTGK DKNFEINFKA LAASPCPEKR VYKNVEANSS 420 AMRRAEEVKA NLPSQFPSFV KYMLPSHVTG GFWLSFPKPF CDLHLPKHDD TVVLVDENEE 480 EYSTKYLIDK NGLSAGWRGF SIAHSLLEGD VLVFQLIQPC KFKVYIIREN RLTEIDGAIS 540 LLNLDFHARP IKSDEDMKIC DAKEETFLEP SALDIPQDDK QEVKLISDSD HGPATDQCGN 600 DSDNGSEILE GIRFSESRID FKDVKDFSGF TILVDGLIIE SEIPAHIRTK YYELCSTQNS 660 FLHDHLFGGL NCKLAAGMIT ETVNIADAIR ASKISTPRDY LETWDNTLKG FECLGMEVGF 720 LRARINKLVS MSGESKQILE TKRNELAEAK EEMKNLEAKL LNVKQVIKNL DSEIEALTGK 780 DKSLEIKFKA LAASP

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence Send to blast

MVDANSSAML RAEEVQANLP SQFPSFIKYM LPSHVTGGFW LGFPKKFCAS YLPKHDDTAV  60
LVDEDGKEYA TKYLVEKNGL SGGWRGFSIA HSLLEGDVLV FQLIQACKFK VYIVRANSLA  120
EIDGAISLLN LDFHARPIKS DEDMKICEAK EETFLEPSAL DIHQDDKQEV ILISDSDHGS  180
SALDIHQDDK QEVILISDSD HDTATEHCGN DSDNGSEVLE GIRFSESKID FKDVKDFSGF  240
NILVDGLIID SEIPAHIRTK YYELCSTQNS FLHDHLFGGL NCKLAAGMIT ETVNIADAIR  300
ASKISIPREY LETWDNTLKG FECLGMEVGF LRARLNKLVS MSSESKQILE TKRNELAEAK  360
EELKNLEAKL SNVKQVIKNL DSEIEALTGK DKNFEINFKA LAASPCPEKR VYKNVEANSS  420
AMRRAEEVKA NLPSQFPSFV KYMLPSHVTG GFWLSFPKPF CDLHLPKHDD TVVLVDENEE  480
EYSTKYLIDK NGLSAGWRGF SIAHSLLEGD VLVFQLIQPC KFKVYIIREN RLTEIDGAIS  540
LLNLDFHARP IKSDEDMKIC DAKEETFLEP SALDIPQDDK QEVKLISDSD HGPATDQCGN  600
DSDNGSEILE GIRFSESRID FKDVKDFSGF TILVDGLIIE SEIPAHIRTK YYELCSTQNS  660
FLHDHLFGGL NCKLAAGMIT ETVNIADAIR ASKISTPRDY LETWDNTLKG FECLGMEVGF  720
LRARINKLVS MSGESKQILE TKRNELAEAK EEMKNLEAKL LNVKQVIKNL DSEIEALTGK  780
DKSLEIKFKA LAASP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018629602.1	0.0	PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X3
STRING	XP_009612763.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3023	23	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-41	B3 family protein