PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00013g00059.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 477aa    MW: 53812.3 Da    PI: 8.4228
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00013g00059.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002792111221
                               EETTTTEEESSHHHHHHHHH CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                               +C+ Cgk+F ++  L  H++
  Peaxi162Scf00013g00059.1  92 VCKECGKRFQSWKALFGHMK 111
                               6******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.473931IPR007087Zinc finger, C2H2
SuperFamilySSF576671.35E-8931No hitNo description
SMARTSM003550.37931IPR015880Zinc finger, C2H2-like
PfamPF139124.5E-6932IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576671.35E-886113No hitNo description
PROSITE profilePS501579.82791116IPR007087Zinc finger, C2H2
SMARTSM003550.01291113IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028093113IPR007087Zinc finger, C2H2
PfamPF139122.9E-893115IPR007087Zinc finger, C2H2
SMARTSM003550.09324346IPR015880Zinc finger, C2H2-like
PfamPF139129.0E-11324348IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.658324351IPR007087Zinc finger, C2H2
SuperFamilySSF576672.22E-7324346No hitNo description
PROSITE patternPS000280326346IPR007087Zinc finger, C2H2
SuperFamilySSF576672.22E-7386413No hitNo description
PROSITE profilePS501579.785391413IPR007087Zinc finger, C2H2
SMARTSM003550.29391413IPR015880Zinc finger, C2H2-like
PfamPF139122.3E-9391414IPR007087Zinc finger, C2H2
PROSITE patternPS000280393413IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MKQDQELRHL CKFCNKSFPC GRSLGGHMRT HLINISAFDD HKNEKYTKKK LPSIEATSSK  60
FADYGLKENH KKTAKFVESS EEDTLLQNQN KVCKECGKRF QSWKALFGHM KCHSDKIVSS  120
MNSTVDEESW NNDANYAIDH KQVILDSQSD NETAAPNRKK RSTRKLKRYM TSTTTSSNVT  180
VVNVSPCVSE IEQEQEEVAM SLIILSRDVG NWIGLNPFTE FSGSSQPHQT EDGVLVKLKK  240
VQNEKPEQGE TSKSNVKACG VPRNGHKMEN SFVPAKENKV EESSKKRNFE LTEGDFSVTS  300
NTKKLKDHAS DSELNQDSEK KIKFQCTTCN KSFHSYQALG GHSTSHRKTK DLQNQATDSK  360
IIKNSSKNNS TIDEFGEKDE SFSVSKKLKG YECPLCFKIF QSGQALGGHK RSHLIAEAKS  420
NNQVVMIEKP IPEIRDFLDL NLPAPVEEES TSEHVGFQPW WIGSSHKHEQ LVGLISN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0066060.0AB006606.1 Petunia x hybrida mRNA for ZPT4-4, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016515360.10.0PREDICTED: zinc finger protein ZAT9-like isoform X1
TrEMBLO220910.0O22091_PETHY; ZPT4-4
STRINGXP_009801846.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44812241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-28C2H2-like zinc finger protein