PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00003g02730.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 292aa    MW: 32575.9 Da    PI: 4.3559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00003g02730.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.1e-092182581055
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r+RR+riN+++ +L+ l+P+      +K++ +++Le+Av Y+k Lq
  Peaxi162Scf00003g02730.1 218 RKRRERINERLKTLQCLIPNG-----TKVDISTMLEEAVLYVKFLQ 258
                               9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-13208274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.469208257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-11213272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-10214263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.36E-11217262No hitNo description
PfamPF000104.9E-7218258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MEPLGAMSEG EWRSLSGMCS TDEEDAFMAQ LLGNCSLPNE LRNISNFGVS SSFWTGHEST  60
TNMGGGREVS VFSSNDTNNS MYGGGSSFHC PVSSQEGYYP CHSKPILMRN DSSITMEYGQ  120
VEGQSIGSSS HDVFPYNQVE AADFLNQDVS NDSMEFDEHI TESVLDGQGL QLGRRDYDQF  180
PEDHMDDEDE SNVSHELNGR KTRASRGSAT DPQSLYARKR RERINERLKT LQCLIPNGTK  240
VDISTMLEEA VLYVKFLQLQ IKLLSSDDHW MYAPIAYNGM DIGLDLKISL PK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019233912.11e-135PREDICTED: transcription factor bHLH139-like
TrEMBLA0A1J6KZP51e-134A0A1J6KZP5_NICAT; Transcription factor bhlh84
STRINGXP_009602073.11e-132(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-52bHLH family protein