PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00003g00428.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 381aa MW: 43236.1 Da PI: 7.6166 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 90 | 125 | 4 | 39 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 k rr+++NReAAr+sR+RKka+i++Le L+ Peaxi162Scf00003g00428.1 90 HKTLRRLAQNREAARKSRLRKKAYIQQLESSRIRLT 125 6889************************97544444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-8 | 82 | 132 | No hit | No description |
SMART | SM00338 | 4.1E-7 | 87 | 150 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.105 | 89 | 133 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-8 | 91 | 134 | No hit | No description |
CDD | cd14708 | 4.42E-22 | 91 | 143 | No hit | No description |
Pfam | PF00170 | 1.8E-8 | 91 | 128 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 94 | 109 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 5.0E-31 | 181 | 256 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MFAENSEMRP PTLNIFPSQP MHVDPSSTKV NTGLISPADS GSKKSSQQSM DLSNSKNDVL 60 SASGPEPKRE WNRKGLNSGS EQDAPKTPDH KTLRRLAQNR EAARKSRLRK KAYIQQLESS 120 RIRLTQLEQE LHRARSQGFH IGSSVLLGDQ GLPVNMGSMS SDAAVFDMEY ARWLEEHHRL 180 MCELRNAMQE HLPEDELRMY VDNCVTHYND IMNLKSMLAK SDVFHLVSGL WKTPAERCFI 240 WLGDFRPSEL IKIIMSQIEP LTEQQFVGIC GLQQSTQEAE DALSQGLESL NQSLSDTIVS 300 DALACPQNMA NYMGQMALAM NKLCTLEGFV RQADNLRHQT IHRLHQILTT RQSARCFLAI 360 AEYFHRLRAL SSLWVARPRQ E |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009626969.1 | 0.0 | PREDICTED: transcription factor TGA2.3-like | ||||
Refseq | XP_018633584.1 | 0.0 | PREDICTED: transcription factor TGA2.3-like | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A1S4BYY0 | 0.0 | A0A1S4BYY0_TOBAC; transcription factor HBP-1b(C38)-like | ||||
STRING | XP_009626969.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2279 | 21 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 0.0 | bZIP family protein |