PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_9399348g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 25078.2 Da PI: 9.1774 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.1 | 7.9e-13 | 104 | 148 | 4 | 48 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++++rr+ +NRe+ArrsR+RK+ ++eL+ v+ L ae + ++ MA_9399348g0010 104 VRKQRRMLSNRESARRSRLRKQHHLDELRAQVAHLRAEHGEIVDK 148 689**********************************98766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.5E-13 | 101 | 165 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.657 | 103 | 145 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.45E-11 | 104 | 159 | No hit | No description |
Pfam | PF00170 | 6.0E-10 | 104 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-9 | 105 | 177 | No hit | No description |
CDD | cd14702 | 3.96E-20 | 106 | 157 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 108 | 123 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MVTSQSYQMD IPKNFVVPIR PAQFSREIYD MGSAQYNNMN IAAHLNASGA KTAVPTMKSM 60 RVSVDKRCPT QDSLYSPGSN GEGISQSRSI SASDEAEVQQ VIDVRKQRRM LSNRESARRS 120 RLRKQHHLDE LRAQVAHLRA EHGEIVDKFN IASQHYAHII EENCLLRSQA QELSRKLQIL 180 QHTINAQSHG GFKTTGIETG NCSAAHLSLE SGTIANSFIS SDLLF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 123 | RRSRLRK |
2 | 117 | 124 | RRSRLRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | H9VT37 | 9e-62 | H9VT37_PINTA; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 3e-27 | basic leucine-zipper 42 |