PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_757530g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 194aa    MW: 21843.1 Da    PI: 7.0442
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_757530g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.81.5e-1574132462
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     +++ rr+ +NRe+ArrsR+RK++ ++eL+   + L+aeN++  ++ +  ++++a  + e
  MA_757530g0010  74 VRKHRRMLSNRESARRSRLRKQQHLDELRAQLDHLKAENEQILEKFNITSQHYAHITEE 132
                     5789****************************************999999999877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1471135IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.39273136IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-973120No hitNo description
SuperFamilySSF579592.01E-1274129No hitNo description
PfamPF001701.1E-1174128IPR004827Basic-leucine zipper domain
CDDcd147021.09E-2076127No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MGSTQYTNMP FSANLNTPGA KTGVPTHRSV PVSVDGGCPT QDSLHSPGDN GEAISHFWSN  60
SASDEAEEQQ VIDVRKHRRM LSNRESARRS RLRKQQHLDE LRAQLDHLKA ENEQILEKFN  120
ITSQHYAHIT EENCLLRSHG LELSHKLQRL QHTLNAQSHG DFETMGVETR NCSAAHMSSA  180
YSTIAHSVFS NLWF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793RRSRLRK
28794RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010254730.15e-30PREDICTED: bZIP transcription factor 11-like
RefseqXP_024396091.12e-29bZIP transcription factor 44-like isoform X1
SwissprotC0Z2L55e-25BZP44_ARATH; bZIP transcription factor 44
TrEMBLH9WFT39e-53H9WFT3_PINTA; Uncharacterized protein (Fragment)
STRINGXP_010254730.12e-29(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.15e-28basic leucine-zipper 42
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]