PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_7513437g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 203aa MW: 23138.5 Da PI: 6.7126 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.6 | 1.4e-29 | 144 | 200 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dgy+WrKYG+K vk+s++pr+Y+rC+ ++C vkk ver+a+d+ +v++tY+g+Hnh MA_7513437g0010 144 EDGYKWRKYGKKLVKNSPNPRNYFRCSDSSCDVKKTVERDAHDNGIVITTYQGKHNH 200 8******************************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.2E-31 | 131 | 202 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-26 | 135 | 203 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.735 | 138 | 203 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.1E-31 | 143 | 202 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-23 | 144 | 200 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MTNFDSRLGH FEAAINAFSK EQSQLLQRPN SLQHMNEGTN PFEPLDFLVF EEEFDHSCTS 60 DDAGEQAYSF NTVKLGPSTP FEYARSFSSN RPCSQGLRSD HNSCVIETHE PLQTMSPDIS 120 SRKRNAERAL KYAFLTRSES DILEDGYKWR KYGKKLVKNS PNPRNYFRCS DSSCDVKKTV 180 ERDAHDNGIV ITTYQGKHNH GSP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 9e-24 | 136 | 203 | 7 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022927982.1 | 4e-33 | probable WRKY transcription factor 51 | ||||
Refseq | XP_023512174.1 | 4e-33 | probable WRKY transcription factor 51 | ||||
TrEMBL | A0A0D6R4C9 | 2e-41 | A0A0D6R4C9_ARACU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 2e-30 | WRKY DNA-binding protein 50 |