PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_65877g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 27588.7 Da PI: 5.2396 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 47 | 96 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g Wv+eIr+p++ ++r++lg+f t+e+Aa+a++ a+ +l+g MA_65877g0010 47 EYRGVRRRS-WGTWVSEIREPKK---KTRIWLGSFNTPEMAARAYDVAAIYLKG 96 69****887.**********854...6***********************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.2E-12 | 46 | 96 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.15E-18 | 47 | 98 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.1E-27 | 47 | 109 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.653 | 47 | 107 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.6E-27 | 47 | 100 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.0E-9 | 48 | 59 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.41E-26 | 48 | 100 | No hit | No description |
PRINTS | PR00367 | 2.0E-9 | 70 | 86 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MVTSSTDTEA SNKSASTTNG GIETIRTQDE AAPSPPQESR LKMQYPEYRG VRRRSWGTWV 60 SEIREPKKKT RIWLGSFNTP EMAARAYDVA AIYLKGKKRC PQPISPSPRH IQAAAAEAAV 120 AFNFASERAR SSGRSSDVNK QERRRPRNPP VSNKHAARPS SDQVSAVIGS DLELEAASVE 180 LPGQMNASNS SSVCPTTEGL GESVIEDDLF ESSNLYANLA EALLLPPPPL FSIPEVEVEE 240 QKLEEGVLWS DF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | D5ABJ6 | 1e-79 | D5ABJ6_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 6e-26 | ERF family protein |