PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_40991g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 446aa    MW: 49755.6 Da    PI: 6.193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_40991g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1141.6e-3528121195
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                    lppGfrFhPtdeelv++yL+kk  +++++  ++i+++d++k+ePwdLp+k+k +ekewyfF  r++ky++g r+nrat++gyWk+tgkd+ev  +
  MA_40991g0010  28 LPPGFRFHPTDEELVTYYLTKKNLDSSFSG-RAIADADVNKCEPWDLPEKTKIGEKEWYFFGLRERKYPRGIRTNRATEAGYWKTTGKDREVEPQ 121
                    79*************************999.89***************99999**************************************9764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.68E-4116147IPR003441NAC domain
PROSITE profilePS5100532.7428179IPR003441NAC domain
PfamPF023656.3E-1629121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MIRTRPRHRA SCLRAMNDSH EAEAQSQLPP GFRFHPTDEE LVTYYLTKKN LDSSFSGRAI  60
ADADVNKCEP WDLPEKTKIG EKEWYFFGLR ERKYPRGIRT NRATEAGYWK TTGKDREVEP  120
QRLDTGKQPG RIERFSEEWV ICRIFEKSAG GKRSSIGPIS RNAYLDLPGS ESLPSLLKSP  180
CNKTTENDQE TRSSESESVT SAKVHDVSCF SIPMEPKGNL TGHHLHQFQY GSSSNYPDSS  240
DQLSGMASLT KQSSYMQNLM LNDPMIYMKM MPAAALFSAS NMKRDQISAI LDQQPETQQL  300
PGLPPSILCN SDMPLPSNSS NLGFSTDAYF SALHNSNAVS KALVAGSPIE PFSSSCLRHK  360
TISNNNTMGA NNCVTSIQWA NDSLSQKILA QPIEEADGAT YFSTYINDEM TSVVCNRLDL  420
PLDQLNSSAS HPVDFDSLWN IGERLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-31151212108Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482EV391e-128A0A482EV39_9SPER; NAC4 domain protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.18e-55NAC domain containing protein 100