PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_33912g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 421aa    MW: 46774.4 Da    PI: 5.6837
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_33912g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.12.6e-171764149
            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                   lppGfrFhPtdeelv++yL+kk+ + +++  ++i+e+d++k+ePwdLp+
  MA_33912g0010 17 LPPGFRFHPTDEELVTYYLTKKILDGTFSG-RAIAEADLNKCEPWDLPA 64
                   79**************************99.89**************93 PP
2NAM385e-127098101129
            NAM 101 glkktLvfykgrapkgektdWvmheyrle 129
                     l+ktLvfykgrapkgekt+Wvmheyrle
  MA_33912g0010  70 TLQKTLVFYKGRAPKGEKTNWVMHEYRLE 98 
                    578************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.4721122IPR003441NAC domain
SuperFamilySSF1019411.44E-3510122IPR003441NAC domain
PfamPF023651.1E-141897IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MNNAHEAEDE AEEHSQLPPG FRFHPTDEEL VTYYLTKKIL DGTFSGRAIA EADLNKCEPW  60
DLPALETAST LQKTLVFYKG RAPKGEKTNW VMHEYRLEGK FSYHRLPKNC KDEWVVCRIF  120
QKSAGGKKTS IGLLSRNAYI DLPGSPSLPS LLESPYNTTA LNDQETGSIE SESGTNSAKA  180
HVSCFSTAMD YPRANFAGHH LHQYQRGNSS NYPDSSDQLS EMARLMKQSS YMHNFMLNDP  240
RIPMNMMPAA ALFSLSNMRR DQISAMLDQQ PGIQQLPVLP PPMLYNPHMP LPSNSSNMGF  300
PTDVNMSALH SSKGLVSQSA GSSMEPSSSS GVHHKTLSND NTMGANNSVA SFQWTNDSLS  360
QKMLAQPIQE VDGAQCLSTD MNDEMTSVVC NRLDRPLDQL DSSAAPPVDF DSLWNIREHL  420
F
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ0760991e-154FJ076099.1 Pinus taeda isolate 5479 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761001e-154FJ076100.1 Pinus taeda isolate 5482 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761011e-154FJ076101.1 Pinus taeda isolate 5489 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761021e-154FJ076102.1 Pinus taeda isolate 5480 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761031e-154FJ076103.1 Pinus taeda isolate 5488 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761041e-154FJ076104.1 Pinus taeda isolate 5484 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761051e-154FJ076105.1 Pinus taeda isolate 5487 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761061e-154FJ076106.1 Pinus taeda isolate 5485 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761071e-154FJ076107.1 Pinus taeda isolate 5477 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761081e-154FJ076108.1 Pinus taeda isolate 5476 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761101e-154FJ076110.1 Pinus taeda isolate 5490 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761111e-154FJ076111.1 Pinus taeda isolate 5491 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761121e-154FJ076112.1 Pinus taeda isolate 5483 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761131e-154FJ076113.1 Pinus taeda isolate 5492 anonymous locus 0_572_01 genomic sequence.
GenBankFJ0761141e-154FJ076114.1 Pinus taeda isolate 5493 anonymous locus 0_572_01 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482EV390.0A0A482EV39_9SPER; NAC4 domain protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.16e-52NAC domain containing protein 100