PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_30617g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 510aa    MW: 54891.2 Da    PI: 9.2876
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_30617g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.73.4e-20361423163
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    e+elkre+rkq+NRe+A+rsR++K+ e+e L+ kv++L++eNkaL++el+ + ke++kl se+
  MA_30617g0010 361 ERELKREKRKQSNRESAKRSRAKKQLECEGLTAKVETLTSENKALRNELNLIAKESEKLASEN 423
                    89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.1E-2957145IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.5E-19186318No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-16356420No hitNo description
SMARTSM003381.9E-18361425IPR004827Basic-leucine zipper domain
PfamPF001701.4E-17361423IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.059363426IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-10364419No hitNo description
CDDcd147029.92E-19366415No hitNo description
PROSITE patternPS000360368383IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MWLIESLPWL LPRPLPQETG INCHQCQQGS KASEGLQQRT LTVISVEQLK NRQLGTQHKS  60
KAAKSYSTLK EQPATPAYPD WQAFQAYYGP GVTPPPAYFA SPVASGPTPP PYMWGGQPLM  120
TPYGTTPPYA AVYQHGGIYT HPSVPPGAHS FNQYSAPSAG NPTEVASISV PSGTETEAKS  180
LWGKGRSSIK KVKGNLEKLQ IVSTKGRSQK ATSSSANGAF SQSGGSGSEG SSEGSEEDNL  240
QNGCETGRKR ILEPLTMNGT PATDTNNLAY NAQAGEAKTT VNRSAMGLLP PAPVPGRSIV  300
SLPTTNLNIG MDMYNAPAQG FVTPVNGRRG TIGIVSTIAP TTAQLIPGRD GAPSELCIQD  360
ERELKREKRK QSNRESAKRS RAKKQLECEG LTAKVETLTS ENKALRNELN LIAKESEKLA  420
SENVSLMELL RNLQGQDRVG DSERNGPRET QSRFMQPGGN HYPQVLYKIS NSSSSQRDEQ  480
RESEMNDSTG KAHAVLEANA QSDTVAADKR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1042120.0BT104212.1 Picea glauca clone GQ02807_L01 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0C9S9I50.0A0A0C9S9I5_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_7691_2463 transcribed RNA sequence
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-58basic region/leucine zipper transcription factor 16