PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_201698g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 273aa    MW: 30049.6 Da    PI: 5.4927
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_201698g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-1958107255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+ +l+g
  MA_201698g0010  58 EYRGVRRRS-WGKWVSEIREPKK---KTRIWLGSFNTPEMAARAYDVAAIYLKG 107
                     69****887.**********854...6***********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.0E-1357107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-3058117IPR001471AP2/ERF domain
SMARTSM003805.5E-3758122IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-2058117IPR016177DNA-binding domain
PROSITE profilePS5103223.39358116IPR001471AP2/ERF domain
PRINTSPR003673.7E-105970IPR001471AP2/ERF domain
CDDcd000181.52E-3059118No hitNo description
PRINTSPR003673.7E-108197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MDNEACSLPE CMLNSSTDTE ASSKSASTAK GGIKTIRTRD EAAPSPPQES RFKMQYPEYR  60
GVRRRSWGKW VSEIREPKKK TRIWLGSFNT PEMAARAYDV AAIYLKGKTH AFLNFPELVD  120
HLPRPISSSP RHIQAAAAEA AVAFDSAAER AGNSGRSSDV TKRERRRPRN PPVSDKHAAT  180
PSSDQVSAVI SSDLKLETAS VELPGQRNAS NPSSVCPTAE ELGESVIEND LFESSNLYTN  240
LAEALLLPPP LFSIPEVEVE EQKLEEGFLW SDF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-15551171173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1171012e-59FJ117101.1 Pinus taeda isolate 4346 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171032e-59FJ117103.2 Pinus taeda isolate 4361 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171042e-59FJ117104.2 Pinus taeda isolate 4349 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171052e-59FJ117105.2 Pinus taeda isolate 4355 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171062e-59FJ117106.2 Pinus taeda isolate 4347 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171072e-59FJ117107.2 Pinus taeda isolate 4348 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171082e-59FJ117108.2 Pinus taeda isolate 4359 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171122e-59FJ117112.1 Pinus taeda isolate 4345 anonymous locus UMN_6348_01 genomic sequence.
GenBankFJ1171132e-59FJ117113.1 Pinus taeda isolate 4356 anonymous locus UMN_6348_01 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABJ63e-88D5ABJ6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-36ERF family protein