PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_19683g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 341aa    MW: 37932.8 Da    PI: 6.7947
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_19683g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-174695255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr+++ +g+WvAeIr p   gk++r +lg+f tae+Aa+a+++a+  l+g
  MA_19683g0010 46 QYRGVRQRS-WGKWVAEIRQP---GKQTRRWLGTFATAEQAAQAYDNAAILLYG 95
                   59****999.**********8...556999******************987766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.6E-2946103IPR001471AP2/ERF domain
CDDcd000181.54E-2946105No hitNo description
PROSITE profilePS5103221.60146103IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-1946103IPR016177DNA-binding domain
SMARTSM003801.1E-3446109IPR001471AP2/ERF domain
PRINTSPR003676.8E-104758IPR001471AP2/ERF domain
PfamPF008473.0E-114793IPR001471AP2/ERF domain
PRINTSPR003676.8E-106985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MKGGNREARC SAVGQENGGL RSTPSAPPSR KRICKGKGGP DNIKFQYRGV RQRSWGKWVA  60
EIRQPGKQTR RWLGTFATAE QAAQAYDNAA ILLYGSRAHL NLQPSGWDHS KSSSHTSKLR  120
PLLPRFTFRL PPAIHGTNPN PNPNPNCFGA IPSGYFQTPT NPDFWPAAMR AAQTDATYNL  180
PVIDPKRETT LEQSSVLHLE EVRVPTQQCN AEVHYESSSL KIDNLQENYG AEITDLQSHK  240
LGGPDQLSGI HGGVVGDELH QGFYSDTTGN IIEPRNHIDG ESRDDNLAAS LQELQYSAAP  300
PSPGFMWHYN IKHDYYYEET NSSTLPETNN QLWDYSDESS I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-1646102259ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLG0ZAE40.0G0ZAE4_PINTA; Putative ABI4-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-25ERF family protein