PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_184464g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 272aa    MW: 30489 Da    PI: 8.7781
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_184464g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75e-17185235255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd       + ++ +lg+f taeeAa a+++a+ k++g
  MA_184464g0010 185 RYRGVRQRP-WGKFAAEIRD----SarQGAKLWLGTFTTAEEAALAYDRAAYKIRG 235
                     7********.**********....33334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.5E-12185235IPR001471AP2/ERF domain
PROSITE profilePS5103222.866185243IPR001471AP2/ERF domain
CDDcd000181.33E-27185245No hitNo description
Gene3DG3DSA:3.30.730.101.5E-29185244IPR001471AP2/ERF domain
SMARTSM003808.6E-34185249IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-21185244IPR016177DNA-binding domain
PRINTSPR003673.8E-10186197IPR001471AP2/ERF domain
PRINTSPR003673.8E-10209225IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MATKGRNQEA EYTEMSVLDR IRIHLLGDSD GQDFESSFYL TGNSRSDRRI SICEQENFIR  60
SALACDSVAD NIPKTETETK TPAVNSSSLS LPVSVTRHES LDWEKFPVGW ELRNYDSVTP  120
PSFNPGLTTA GAKFPLDGND SKDITLSGIP KEAVEKRWIT PKEETETETK KETHIFPVRK  180
SSGRRYRGVR QRPWGKFAAE IRDSARQGAK LWLGTFTTAE EAALAYDRAA YKIRGSRALF  240
NFPHLVSGES NICTTSKKPR SNGANFKKVE ET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-29181249170ATERF1
3gcc_A2e-29181249170ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLC0PQI31e-89C0PQI3_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-22ethylene responsive element binding factor 1