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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | MA_134559g0010 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family | WRKY | ||||||||
| Protein Properties | Length: 289aa MW: 33272.8 Da PI: 9.7583 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 56.5 | 5.7e-18 | 252 | 289 | 2 | 38 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38
+Dg++WrKYGqK+ ++++ prsYYrC++a +Cpvk++v
MA_134559g0010 252 SDGCQWRKYGQKMTRNNTQPRSYYRCAMApSCPVKRQV 289
7***************************99******98 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 3.6E-18 | 239 | 289 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 3.66E-16 | 243 | 289 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 17.523 | 246 | 289 | IPR003657 | WRKY domain |
| SMART | SM00774 | 1.4E-7 | 251 | 289 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 1.2E-14 | 253 | 289 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 289 aa Download sequence Send to blast |
MEGHKSKMMT MLVAEINRMN EENQNLNSML NHMISNHDNL EKQIRSLVQE KQQLTGVDTI 60 QIVNPHHKSE DKFNLRILSP RSAEIESNGA VSHQSYHSSD CHDRVREMEG KTHKFMDDMQ 120 LPSKKRKTNY VQLDQSQNGM IINSSINDSP AVVSHQSYHS SDCHGRVWEM EGKKSKFMDD 180 MLLPSKKRKI NYVQLDQIHN VMIDSSMDDS LICDEPPKKK HSRLNKGSSQ QMAAAPKKIV 240 SVRTRTNVSV ISDGCQWRKY GQKMTRNNTQ PRSYYRCAMA PSCPVKRQV |
| Annotation -- Nucleotide ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | |||
| GenBank | EU269846 | 6e-35 | EU269846.1 Pinus monticola putative WRKY transcription factor PmWRKY72 gene, partial cds. | |||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP14 | 17 | 875 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G22070.1 | 1e-19 | WRKY DNA-binding protein 31 | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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