PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_127542g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 465aa    MW: 49164.4 Da    PI: 6.2593
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_127542g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.62.8e-23321383163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++kv++L+ eN+aL++el+++ +e++kl++e+
  MA_127542g0020 321 ERELKRQRRKQSNRESARRSRLRKQAECEELATKVDTLTVENMALRNELNRMAEECKKLTAEN 383
                     89*********************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.4E-33198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.6E-28137278No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-19315380No hitNo description
PfamPF001701.2E-20321383IPR004827Basic-leucine zipper domain
SMARTSM003383.3E-22321385IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.53323386IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.38E-11324380No hitNo description
CDDcd147025.8E-25326376No hitNo description
PROSITE patternPS000360328343IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MGTGEEGTPT KPPAKPSSSS QETPTTPVYP DWAAAFQAYY GPGATPPPPA FFASTVGSAP  60
TPHPYMWGGQ PLMPPYGTPL PYPAMYPHGG IYAHPSMPPG ALPYGHYGMP SPGNAEVTTT  120
LALPNAEAEA KSSEGKERNT MKRSKGSLGS LGMITGKGGE GGKATSGSAN EAMSQSGDSG  180
SDGSSEGSEE DNTQNESQVA RKRSFDQMIV DGANAQGTNM SAYNTQTGEP YVASSGHAMG  240
NPISQAVVPL GSVTGKPATS GPITNLNIGM DYWNAAAPGA ITTVKGRGST AGIPTAIVPT  300
TAQLMPPGRD GVPPELWIQD ERELKRQRRK QSNRESARRS RLRKQAECEE LATKVDTLTV  360
ENMALRNELN RMAEECKKLT AENASIMERL KKLHGEDMTT ITEENGSTKI SLQSVKPEGN  420
GHFHDISRGI NSNSTERNEQ RQSETCDSNG KVHTLLDANA RSDTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1337343RRSRLRK
2337344RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1152060.0BT115206.1 Picea glauca clone GQ03611_H02 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010244323.11e-128PREDICTED: G-box-binding factor 1-like isoform X2
TrEMBLA0A0C9QT240.0A0A0C9QT24_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_10978_2763 transcribed RNA sequence
STRINGXP_010244321.11e-125(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-71basic region/leucine zipper transcription factor 16