PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_105743g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 286aa    MW: 31539.3 Da    PI: 8.8289
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_105743g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.18.2e-13164223463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     +++ r++ +NRe+ArrsR+RK+   + L+  v+ L aeN +  ++ +   +++a+ + e+
  MA_105743g0010 164 VRKKRKMLSNRESARRSRLRKQLHFDALRAQVAHLRAENGQILNKFNIAAQHYAQITEEN 223
                     5789***************************************99999999999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-14161225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-8163208No hitNo description
PROSITE profilePS502179.772163226IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.57E-10164219No hitNo description
PfamPF001707.2E-10164223IPR004827Basic-leucine zipper domain
CDDcd147028.83E-19166217No hitNo description
PROSITE patternPS000360168183IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MVSSPIQIDS SQAAKGVVME SETAAATAFS FFGADRMIVW PGSERAGPVL SSVTGLQSNQ  60
MFISHSNQMG IHKSSVVPIH PTQLSGDIYD MGSTQYNNMN FSANADDPGA KTAVPSKRPV  120
PVSLDKRCRT QYSLHSPGRN GEAISYSWNN STSDETEDRQ VIDVRKKRKM LSNRESARRS  180
RLRKQLHFDA LRAQVAHLRA ENGQILNKFN IAAQHYAQIT EENSQLTSHA LELIQKLQRL  240
HHTINAQSHR AFKTMGIETG ICSGAHLSTE SDTIAQCFIE ASDLLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177183RRSRLRK
2177184RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLH9WFT79e-51H9WFT7_PINTA; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-28basic leucine-zipper 42