PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10432800g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 154aa MW: 17593.4 Da PI: 11.4637 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.9 | 1.6e-10 | 108 | 141 | 2 | 40 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtae 40 +y+GVr+++ rg+WvAeIr ps r r +lg+ + + MA_10432800g0010 108 KYRGVRRRR-RGKWVAEIRNPS----RgVRLWLGTCDN-Q 141 7*****887.8*********84....36******9887.4 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 7.1E-18 | 4 | 147 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
Gene3D | G3DSA:3.30.730.10 | 3.5E-13 | 108 | 142 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.5E-5 | 108 | 137 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-8 | 108 | 142 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 14.078 | 108 | 154 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-4 | 108 | 148 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MPAPKNKNNM TIRASKKEKN GPLIRKIRLI CSDPDATDLS SDDELKPPVS QKRLVREIHI 60 PLNSSAGTKI QFKPKSRSKS KRKSKVPNKE NAVLFESASN VECAVSWKYR GVRRRRRGKW 120 VAEIRNPSRG VRLWLGTCDN QKSLQRSQAM AWDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 1e-07 | cytokinin response factor 4 |