PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10432362g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 25224.2 Da PI: 7.2939 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.2 | 3.8e-29 | 108 | 165 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYG+K vk+s++pr+YYrC+ ++C vkk ver+a+d+ +v++ Y g+Hnhe MA_10432362g0010 108 EDGYKWRKYGKKFVKNSPNPRNYYRCSDSNCDVKKTVERDAHDKGIVITSYLGRHNHE 165 8********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-30 | 95 | 167 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-26 | 99 | 167 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.7 | 102 | 167 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.6E-31 | 107 | 166 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.7E-23 | 108 | 165 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MNEKAEAFEP SDFLDLEEDF NHSCKNEDAD DQAYNFNIVK TGPSIRREYA DSFPSNPPCI 60 RGLHLDHNST VIQTHPQETM TPKKSRKRKA ERALKYAFLT RSETDILEDG YKWRKYGKKF 120 VKNSPNPRNY YRCSDSNCDV KKTVERDAHD KGIVITSYLG RHNHESPCVI YNHESPCVVY 180 YIGKPETLQL PCRPTASPIL QHISPVCSYV PESFEQHH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-22 | 100 | 167 | 7 | 74 | WRKY transcription factor 1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 6e-30 | WRKY DNA-binding protein 57 |